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Structure-Guided Design and Development of Novel Cyclophilin A Inhibitors and Ganoderiol-F Derivatives: An In-Silico Approach
Published on: June 23, 2026
Yellow lupine cyclophilin interacts with nucleic acids
Katarzyna Nuc1, Krzysztof Leśniewicz, Przemysław Nuc
1University of Natural Sciences, Department of Biochemistry and Biotechnology, ul. Wołyńska 35, 60-637 Poznań, Poland. ktnuc@owl.au.poznan.pl
Protein and Peptide Letters
|September 11, 2008
Summary
Yellow lupine cytosolic cyclophilin was expressed and purified from E. coli. This protein shows peptidyl-prolyl cis/trans isomerase activity and can bind to both DNA and RNA molecules.
Area of Science:
- Biochemistry
- Molecular Biology
- Plant Science
Background:
- Cytosolic cyclophilins are a class of proteins involved in various cellular processes.
- Understanding plant cyclophilins is crucial for deciphering their roles in plant physiology.
Purpose of the Study:
- To characterize the biochemical properties of yellow lupine cytosolic cyclophilin.
- To investigate its enzymatic activity and nucleic acid binding capabilities.
Main Methods:
- Construction of an expression vector (pET15CYP) for yellow lupine cyclophilin (CyP).
- Expression and purification of recombinant CyP in E. coli.
- Assay of peptidyl-prolyl cis/trans isomerase activity using a synthetic oligopeptide.
- Assessment of nucleic acid binding using DNA and RNA fragments.
Main Results:
- The yellow lupine CyP cDNA encodes a 172-amino acid protein with conserved structural features.
- Purified recombinant yellow lupine cyclophilin demonstrated peptidyl-prolyl cis/trans isomerase activity.
- The recombinant cyclophilin exhibited binding affinity for both single-stranded and double-stranded DNA, as well as RNA.
Conclusions:
- Yellow lupine cytosolic cyclophilin possesses enzymatic activity characteristic of its class.
- This protein has a potential role in interacting with nucleic acids.
- Further studies are warranted to elucidate the specific biological functions of this cyclophilin in yellow lupine.

