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Updated: May 8, 2026

Characterizing DNA Repair Processes at Transient and Long-lasting Double-strand DNA Breaks by Immunofluorescence Microscopy
Published on: June 8, 2018
DNA double-strand breaks activate a multi-functional genetic program in developing lymphocytes
Andrea L Bredemeyer1, Beth A Helmink, Cynthia L Innes
1Department of Pathology and Immunology, Washington University School of Medicine, St. Louis, Missouri 63110, USA.
Abstract:
DNA double-strand breaks are generated by genotoxic agents and by cellular endonucleases as intermediates of several important physiological processes. The cellular response to genotoxic DNA breaks includes the activation of transcriptional programs known primarily to regulate cell-cycle checkpoints and cell survival. DNA double-strand breaks are generated in all developing lymphocytes during the assembly of antigen receptor genes, a process that is essential for normal lymphocyte development. Here we show that in murine lymphocytes these physiological DNA breaks activate a broad transcriptional program. This program transcends the canonical DNA double-strand break response and includes many genes that regulate diverse cellular processes important for lymphocyte development. Moreover, the expression of several of these genes is regulated similarly in response to genotoxic DNA damage. Thus, physiological DNA double-strand breaks provide cues that can regulate cell-type-specific processes not directly involved in maintaining the integrity of the genome, and genotoxic DNA breaks could disrupt normal cellular functions by corrupting these processes.
Insights
Physiological DNA double-strand breaks in lymphocytes activate a broad transcriptional program beyond DNA repair. This response influences lymphocyte development and may be disrupted by genotoxic damage.
Area of Science:
- Molecular Biology
- Immunology
- Genetics
Background:
- DNA double-strand breaks (DSBs) are critical DNA lesions.
- Cellular responses to DSBs typically involve cell-cycle checkpoints and survival pathways.
- DSBs are intentionally generated during lymphocyte development for antigen receptor gene assembly.
Purpose of the Study:
- To investigate the transcriptional response to physiological DSBs during lymphocyte development.
- To determine if this response differs from the canonical DSB response.
- To explore the implications for lymphocyte development and genotoxic damage.
Main Methods:
- Analysis of gene expression in murine lymphocytes.
- Comparison of transcriptional profiles following physiological and genotoxic DSB induction.
Main Results:
- Physiological DSBs in lymphocytes trigger a broad transcriptional program.
- This program extends beyond canonical DNA damage response genes.
- Many induced genes are involved in diverse cellular processes crucial for lymphocyte development.
- Some gene expression patterns overlap between physiological and genotoxic DSB responses.
Conclusions:
- Physiological DSBs act as signaling cues regulating cell-type-specific processes beyond genome maintenance.
- Genotoxic DSBs may impair normal cellular functions by interfering with these developmental pathways.
- Understanding these distinct transcriptional programs is vital for lymphocyte biology and toxicology.
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