DNA double-strand breaks activate a multi-functional genetic program in developing lymphocytes

Andrea L Bredemeyer1, Beth A Helmink, Cynthia L Innes

  • 1Department of Pathology and Immunology, Washington University School of Medicine, St. Louis, Missouri 63110, USA.

Nature
|October 14, 2008
PubMed

Insights

Physiological DNA double-strand breaks in lymphocytes activate a broad transcriptional program beyond DNA repair. This response influences lymphocyte development and may be disrupted by genotoxic damage.

Area of Science:

  • Molecular Biology
  • Immunology
  • Genetics

Background:

  • DNA double-strand breaks (DSBs) are critical DNA lesions.
  • Cellular responses to DSBs typically involve cell-cycle checkpoints and survival pathways.
  • DSBs are intentionally generated during lymphocyte development for antigen receptor gene assembly.

Purpose of the Study:

  • To investigate the transcriptional response to physiological DSBs during lymphocyte development.
  • To determine if this response differs from the canonical DSB response.
  • To explore the implications for lymphocyte development and genotoxic damage.

Main Methods:

  • Analysis of gene expression in murine lymphocytes.
  • Comparison of transcriptional profiles following physiological and genotoxic DSB induction.

Main Results:

  • Physiological DSBs in lymphocytes trigger a broad transcriptional program.
  • This program extends beyond canonical DNA damage response genes.
  • Many induced genes are involved in diverse cellular processes crucial for lymphocyte development.
  • Some gene expression patterns overlap between physiological and genotoxic DSB responses.

Conclusions:

  • Physiological DSBs act as signaling cues regulating cell-type-specific processes beyond genome maintenance.
  • Genotoxic DSBs may impair normal cellular functions by interfering with these developmental pathways.
  • Understanding these distinct transcriptional programs is vital for lymphocyte biology and toxicology.

Related Concept Videos

Fixing Double-strand Breaks02:04

Fixing Double-strand Breaks

The double-stranded structure of DNA has two major advantages. First, it serves as a safe repository of genetic information where one strand serves as the back-up in case the other strand is damaged. Second, the double-helical structure can be wrapped around proteins called histones to form nucleosomes, which can then be tightly wound to form chromosomes. This way, DNA chains up to 2 inches long can be contained within microscopic structures in a cell. A double-stranded break not only damages...
DNA Damage can Stall the Cell Cycle02:36

DNA Damage can Stall the Cell Cycle

In response to DNA damage, cells can pause the cell cycle to assess and repair the breaks. However, the cell must check the DNA at certain critical stages during the cell cycle. If the cell cycle pauses before DNA replication, the cells will contain twice the amount of DNA. On the other hand, if cells arrest after DNA replication but before mitosis, they will contain four times the normal amount of DNA. With a host of specialized proteins at their disposal,cells must use the right protein at...
Homologous Recombination02:31

Homologous Recombination

The basic reaction of homologous recombination (HR) involves two chromatids that contain DNA sequences sharing a significant stretch of identity. One of these sequences uses a strand from another as a template to synthesize DNA in an enzyme-catalyzed reaction. The final product is a novel amalgamation of the two substrates. To ensure an accurate recombination of sequences, HR is restricted to the S and G2 phases of the cell cycle. At these stages, the DNA has been replicated already and the...
Nucleotide Excision Repair01:38

Nucleotide Excision Repair

DNA Distortion and Damage
Cells are regularly exposed to mutagens—factors in the environment that can damage DNA and generate mutations. UV radiation is one of the most common mutagens and is estimated to introduce a significant number of changes in DNA. These include bends or kinks in the structure, which can block DNA replication or transcription. If these errors are not fixed, the damage can cause mutations, which in turn can result in cancer or disease depending on which sequences are...
Fixing Double-strand Breaks02:04

Fixing Double-strand Breaks

The double-stranded structure of DNA has two major advantages. First, it serves as a safe repository of genetic information where one strand serves as the back-up in case the other strand is damaged. Second, the double-helical structure can be wrapped around proteins called histones to form nucleosomes, which can then be tightly wound to form chromosomes. This way, DNA chains up to 2 inches long can be contained within microscopic structures in a cell. A double-stranded break not only damages...
DNA Damage Can Stall the Cell Cycle02:36

DNA Damage Can Stall the Cell Cycle

In response to DNA damage, cells can pause the cell cycle to assess and repair the breaks. However, the cell must check the DNA at certain critical stages during the cell cycle. If the cell cycle pauses before DNA replication, the cells will contain twice the amount of DNA. On the other hand, if cells arrest after DNA replication but before mitosis, they will contain four times the normal amount of DNA. With a host of specialized proteins at their disposal,cells must use the right protein at...