The P. furiosus mre11/rad50 complex promotes 5' strand resection at a DNA double-strand break

Ben B Hopkins1, Tanya T Paull

  • 1The Howard Hughes Medical Institute, Department of Molecular Genetics and Microbiology, University of Texas at Austin, Austin, TX 78712, USA.

Cell
|October 30, 2008
PubMed

Insights

The Mre11/Rad50 complex, with HerA and NurA, processes DNA double-strand breaks (DSBs) in archaea. This generates essential 3' single-stranded DNA for homologous recombination repair, offering insights into eukaryotic DNA repair mechanisms.

Area of Science:

  • Molecular Biology
  • Genetics
  • Biochemistry

Background:

  • The Mre11/Rad50 complex is crucial for DNA double-strand break (DSB) repair via homologous recombination.
  • Its enzymatic activity alone is insufficient for generating the 3' single-stranded DNA required for recombinase loading.

Purpose of the Study:

  • To investigate the cooperative function of Mre11/Rad50 with HerA and NurA in DNA end resection in archaea.
  • To elucidate the mechanism of DSB processing in thermophilic archaea and its relevance to eukaryotes.

Main Methods:

  • Purification of Mre11, Rad50, HerA, and NurA from Pyrococcus furiosus.
  • In vitro biochemical assays to assess DNA end resection and strand exchange activities.

Main Results:

  • Purified Mre11 and Rad50 from P. furiosus, along with HerA and NurA, cooperatively resect the 5' strand of DNA ends in vitro.
  • The generated 3' single-stranded DNA is substrates for the archaeal RecA homolog, RadA, to catalyze strand exchange.

Conclusions:

  • The Mre11/Rad50 complex, in conjunction with HerA and NurA, facilitates DNA end resection in archaea.
  • This archaeal system provides a model for understanding conserved mechanisms of DSB processing in eukaryotes.

Related Concept Videos

Nucleotide Excision Repair01:08

Nucleotide Excision Repair

Overview
33.7K
Base Excision Repair01:54

Base Excision Repair

One of the common DNA damages is the chemical alteration of single bases by alkylation, oxidation, or deamination. The altered bases cause mispairing and strand breakage during replication. This type of damage causes minimal change to the DNA double helix structure and can be repaired by the base excision repair (BER) pathways. BER corrects damaged DNA sequences by removing the damaged base and restoring the original base sequence using the complementary strand as a template.
The first step of...
20.3K
Long-patch Base Excision Repair01:02

Long-patch Base Excision Repair

Since the discovery of the two BER pathways, there has been a debate about how a cell chooses one pathway over the other and the factors determining this selection. Numerous in vitro experiments have pointed out multiple determinants for the sub-pathway selection. These are:
6.3K
Homologous Recombination02:31

Homologous Recombination

The basic reaction of homologous recombination (HR) involves two chromatids that contain DNA sequences sharing a significant stretch of identity. One of these sequences uses a strand from another as a template to synthesize DNA in an enzyme-catalyzed reaction. The final product is a novel amalgamation of the two substrates. To ensure an accurate recombination of sequences, HR is restricted to the S and G2 phases of the cell cycle. At these stages, the DNA has been replicated already and the...
58.8K
Restarting Stalled Replication Forks02:37

Restarting Stalled Replication Forks

DNA replication is initiated at sites containing predefined DNA sequences known as origins of replication. DNA is unwound at these sites by the minichromosome maintenance (MCM) helicase and other factors such as Cdc45 and the associated GINS complex.The unwound single strands are protected by replication protein A (RPA) until DNA polymerase starts synthesizing DNA at the 5’ end of the strand in the same direction as the replication fork. To prevent the replication fork from falling apart,...
5.1K
Nucleotide Excision Repair01:38

Nucleotide Excision Repair

DNA Distortion and Damage
Cells are regularly exposed to mutagens—factors in the environment that can damage DNA and generate mutations. UV radiation is one of the most common mutagens and is estimated to introduce a significant number of changes in DNA. These include bends or kinks in the structure, which can block DNA replication or transcription. If these errors are not fixed, the damage can cause mutations, which in turn can result in cancer or disease depending on which sequences are...
4.6K