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A Metadata Extraction Approach for Clinical Case Reports to Enable Advanced Understanding of Biomedical Concepts
Published on: September 20, 2018
Identification and extraction of family history information from clinical reports
Sergey Goryachev1, Hyeoneui Kim, Qing Zeng-Treitler
1Decision Systems Group, Brigham and Women's Hospital, Harvard Medical School,Boston, MA, USA.
Abstract:
Many clinical reports contain family history, which is valuable information for clinical decision support and research. We developed a simple natural language processing algorithm to identify and extract family histories. The algorithm was tested on a set of discharge summaries and outpatient clinic notes. The precision and recall of extracting all diagnoses were 85.12% and 86.93%, respectively. The precision and recall of differentiating family history from patient history diagnoses were 96.30% and 92.86%, respectively. Both the precision and recall of exact family member assignment were 92.31%.
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