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Updated: Jun 26, 2026

Two- and Three-Dimensional Live Cell Imaging of DNA Damage Response Proteins
Published on: September 28, 2012
The role of Dbf4/Drf1-dependent kinase Cdc7 in DNA-damage checkpoint control
Toshiya Tsuji1, Eric Lau, Gary G Chiang
1The Burnham Institute for Medical Research, 10901 North Torrey Pines Road, La Jolla, CA 92037, USA.
Abstract:
The Dbf4/Drf1-dependent S-phase-promoting kinase Cdc7 (Ddk) is thought to be an essential target inactivated by the S-phase checkpoint machinery that inhibits DNA replication. However, we show here that the complex formation, chromatin association, and kinase activity of Ddk are not inhibited during the DNA-damage-induced S-phase checkpoint response in Xenopus egg extracts and mammalian cells. Instead, we find that Ddk plays an active role in regulating S-phase checkpoint signaling. Addition of purified Ddk to Xenopus egg extracts or overexpression of Dbf4 in HeLa cells downregulates ATR-Chk1 checkpoint signaling and overrides the inhibition of DNA replication and cell-cycle progression induced by DNA-damaging agents. These results indicate that Ddk functions as an upstream regulator to monitor S-phase checkpoint signaling. We propose that Ddk modulates the S-phase checkpoint control by attenuating checkpoint signaling and triggering DNA replication reinitiation during the S-phase checkpoint recovery.
Insights
The Cdc7 kinase complex (Ddk) is not inhibited by DNA-damage checkpoints. Instead, Ddk actively regulates these checkpoints, promoting DNA replication recovery during S-phase.
Area of Science:
- Cell Biology
- Molecular Biology
- DNA Replication
Background:
- The S-phase checkpoint machinery typically inhibits DNA replication upon DNA damage.
- Cdc7 kinase complex (Ddk) was believed to be inactivated by this checkpoint.
Purpose of the Study:
- To investigate the role of Ddk during the DNA-damage-induced S-phase checkpoint.
- To determine if Ddk activity is inhibited by checkpoint signaling.
Main Methods:
- Experiments were conducted using Xenopus egg extracts and mammalian (HeLa) cells.
- Ddk activity was assessed through complex formation, chromatin association, and kinase assays.
- The effect of Ddk on checkpoint signaling was evaluated by adding purified Ddk or overexpressing Dbf4.
Main Results:
- Ddk complex formation, chromatin association, and kinase activity remain active during the DNA-damage S-phase checkpoint.
- Ddk addition or Dbf4 overexpression downregulates ATR-Chk1 signaling.
- This downregulation overrides the DNA replication and cell-cycle progression inhibition caused by DNA-damaging agents.
Conclusions:
- Ddk functions as an upstream regulator of S-phase checkpoint signaling, not a target of inhibition.
- Ddk attenuates checkpoint signaling and promotes DNA replication reinitiation during checkpoint recovery.
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