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Deep Proteome Profiling by Isobaric Labeling, Extensive Liquid Chromatography, Mass Spectrometry, and Software-assisted Quantification
Published on: November 15, 2017
Cell proteomic footprint
Petr Lokhov1, Elena Balashova, Maxim Dashtiev
1Analytical Department, ZAO BioBohemia, Russia, Garibaldi st. 4, 117418 Moscow, Russia. lokhovpg@rambler.ru
Rapid Communications in Mass Spectrometry : RCM
|February 3, 2009
Summary
Researchers developed a rapid, cost-effective method to authenticate mammalian cell cultures and subpopulations. This technique analyzes released cell surface protein fragments using mass spectrometry for precise identification, advancing cell therapy and biotechnology.
Area of Science:
- Biotechnology
- Cell Biology
- Proteomics
Background:
- Accurate authentication of mammalian cell cultures and subpopulations is crucial for biotechnology and cell therapy.
- Existing authentication methods are often inefficient, complex, or costly.
Purpose of the Study:
- To develop a simple, rapid, high-throughput, and cost-effective method for cell authentication.
- To enable sensitive identification of cell cultures and their subpopulations.
Main Methods:
- Cells are treated with protease under mild conditions to release cell surface protein fragments.
- Mass spectrometry is used to analyze the composition of these released protein fragments.
- The resulting mass spectrum serves as a unique identifier for comparison with known cell spectra.
Main Results:
- The method demonstrated high speed, high throughput, low sample cost, and high sensitivity.
- Analysis of released protein fragments effectively characterized cell surface protein composition.
- The technique successfully verified subpopulations of human fibroblasts with distinct origins and medical characteristics.
Conclusions:
- This novel approach provides a straightforward and efficient means for cell authentication.
- The technique has significant potential for applications in biotechnology and cell therapy.
- The method's sensitivity and cost-effectiveness make it a valuable tool for biological research.
