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Updated: Jun 26, 2026

Functional Characterization of RING-Type E3 Ubiquitin Ligases In Vitro and In Planta
Published on: December 5, 2019
A function for the RING finger domain in the allosteric control of MDM2 conformation and activity
Bartosz Wawrzynow1, Susanne Pettersson, Alicja Zylicz
1Cancer Research UK (CRUK) Interferon and Cell Signalling Group, University of Edinburgh, Crewe Road South, Edinburgh EH4 2SR, Scotland, United Kingdom.
Abstract:
The MDM2 oncoprotein plays multiple regulatory roles in the control of p53-dependent gene expression. A picture of MDM2 is emerging where structurally discrete but interdependent functional domains are linked through changes in conformation. The domain structure includes: (i) a hydrophobic pocket at the N terminus of MDM2 that is involved in both its transrepressor and E3-ubiqutin ligase functions, (ii) a central acid domain that recognizes a ubiquitination signal in the core DNA binding domain of p53, and (iii) a C-terminal C2H2C4 RING finger domain that is required for E2 enzyme-binding and ATP-dependent molecular chaperone activity. Here we show that the binding affinity of MDM2s hydrophobic pocket can be regulated through the RING finger domain and that increases in pocket affinity are reflected by a gain in MDM2 transrepressor activity. Thus, mutations within the RING domain that affect zinc coordination, but not one that inhibits ATP binding, produce MDM2 proteins that have a higher affinity for the BOX-I transactivation domain of p53 and a reduced I(0.5) for p53 transrepression. An allosteric model for regulation of the hydrophobic pocket is supported by differences in protein conformation and pocket accessibility between wild-type and the RING domain mutant MDM2 proteins. Additionally the data demonstrate that the complex relationship between different domains of MDM2 can impact on the efficacy of anticancer drugs directed toward its hydrophobic pocket.
Insights
The MDM2 oncoprotein
Area of Science:
- Molecular Biology
- Oncology
- Protein Structure and Function
Background:
- The MDM2 oncoprotein regulates p53-dependent gene expression through distinct functional domains.
- Understanding MDM2's domain interactions is crucial for cancer therapy.
- MDM2 possesses an N-terminal hydrophobic pocket, a central acidic domain, and a C-terminal RING finger domain.
Purpose of the Study:
- To investigate the regulatory relationship between the MDM2 RING finger domain and its N-terminal hydrophobic pocket.
- To elucidate how structural changes in MDM2 impact its binding affinity and transrepressor activity on p53.
- To explore the implications of MDM2 domain interactions for anticancer drug efficacy.
Main Methods:
- Site-directed mutagenesis of the MDM2 RING finger domain.
- Analysis of protein conformation and pocket accessibility using biophysical techniques.
- Assays to measure MDM2 binding affinity to p53 and transrepression activity.
Main Results:
- The MDM2 RING finger domain allosterically regulates the binding affinity of the N-terminal hydrophobic pocket.
- Mutations affecting zinc coordination in the RING domain increase pocket affinity and MDM2 transrepressor activity.
- Altered MDM2 conformation and pocket accessibility were observed in RING domain mutants.
Conclusions:
- MDM2's functional domains are interdependent, with the RING finger domain allosterically controlling the hydrophobic pocket.
- This allosteric regulation impacts p53 binding and transrepression, influencing cancer drug targeting.
- The findings provide insights into MDM2's complex regulatory mechanisms and therapeutic vulnerabilities.
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