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Updated: Jun 25, 2026

An Intestinal Gut Organ Culture System for Analyzing Host-Microbiota Interactions
Published on: June 30, 2021
Diagnosis of small intestinal bacterial overgrowth: the challenges persist!
Ahmed Abu-Shanab1, Eamonn Mm Quigley
1Alimentary Pharmabiotic Center, Department of Medicine, University College Cork, Cork, Ireland. shanabu17@hotmail.com
Abstract:
Small intestinal bacterial overgrowth was originally defined in the context of an overt malabsorption syndrome and diagnostic tests were developed and validated accordingly. More recently, the concept of intestinal contamination with excessive numbers of bacteria, especially those of colonic type, has been extended beyond the bounds of frank maldigestion and malabsorption to explain symptomatology in disorders as diverse as irritable bowel syndrome, celiac sprue and nonalcoholic fatty liver disease. Owing to a lack of consensus with regard to the optimal diagnostic criteria (the 'gold standard') for the diagnosis of bacterial overgrowth, the status of these new concepts is unclear. This review sets out to critically appraise the various diagnostic approaches that have been taken and are currently employed to diagnose small intestinal bacterial overgrowth.
Insights
Small intestinal bacterial overgrowth (SIBO) diagnosis lacks a gold standard, complicating its application beyond malabsorption. This review critically appraises current diagnostic methods for SIBO.
Area of Science:
- Gastroenterology
- Microbiology
- Internal Medicine
Background:
- Small intestinal bacterial overgrowth (SIBO) was historically linked to malabsorption syndromes.
- The concept of SIBO has expanded to explain symptoms in conditions like IBS, celiac disease, and NAFLD.
Purpose of the Study:
- To critically review and appraise diagnostic approaches for SIBO.
- To address the lack of consensus on optimal diagnostic criteria for SIBO.
Main Methods:
- Literature review of diagnostic tests for SIBO.
- Critical appraisal of existing diagnostic criteria and methodologies.
Main Results:
- Current diagnostic methods for SIBO lack a universally accepted gold standard.
- The expanded application of SIBO concepts faces diagnostic uncertainty.
Conclusions:
- There is a need for consensus on standardized diagnostic criteria for SIBO.
- Further research is required to validate diagnostic approaches for SIBO in diverse conditions.
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