Ribonuclease H: the enzymes in eukaryotes
Susana M Cerritelli1, Robert J Crouch
1Program in Genomics of Differentiation, Eunice Kennedy Shriver National Institute of Child Health and Human Development, National Institutes of Health, Bethesda, MD 20892, USA.
The FEBS Journal
|February 21, 2009
Summary
Ribonucleases H (RNase H) enzymes are vital for DNA stability in higher eukaryotes. Eukaryotic RNase H1 and RNase H2 are essential for development and preventing neurological disorders.
Area of Science:
- Molecular Biology
- Enzymology
- Genetics
Background:
- Ribonucleases H (RNase H) enzymes degrade the RNA strand in RNA/DNA hybrids, crucial for resolving replication and repair intermediates.
- Eukaryotic RNases H (H1 and H2) are more complex than prokaryotic counterparts, with distinct structural and functional characteristics.
- RNase H activity is essential for genomic stability and cellular viability in higher eukaryotes, unlike in some prokaryotes and single-cell organisms.
Purpose of the Study:
- To review recent findings on eukaryotic RNase H1 and RNase H2, emphasizing structural and in vivo functional aspects.
- To highlight the importance of RNase H enzymes in DNA replication, repair, and overall genomic integrity in higher eukaryotes.
Main Methods:
- Analysis of structural data for human RNase H1 in complex with RNA/DNA hybrids.
- Review of in vivo studies investigating the functions of eukaryotic RNase H1 and RNase H2.
- Examination of phenotypes in knockout models (e.g., Rnaseh1 null mice) and human genetic disorders associated with RNase H2 mutations.
Main Results:
- Structural studies reveal detailed mechanisms of RNA/DNA hybrid recognition and cleavage by human RNase H1 domains.
- Eukaryotic RNase H1 is essential for mitochondrial DNA replication during embryogenesis, with null mice showing developmental arrest.
- Mutations in human RNase H2 subunits lead to Aicardi-Goutières syndrome, a severe neurological disorder, underscoring its in vivo importance.
Conclusions:
- Eukaryotic RNase H1 and RNase H2 play indispensable roles in maintaining genomic stability and normal development in higher eukaryotes.
- Understanding RNase H structure-function relationships provides insights into essential cellular processes and human disease pathogenesis.
- RNase H enzymes represent critical targets for further research into DNA metabolism and associated genetic disorders.
Related Concept Videos
Ribozymes
The term ribozyme is used for RNA that can act as an enzyme. Ribozymes are mainly found in selected viruses, bacteria, plant organelles, and lower eukaryotes. Ribozymes were first discovered in 1982 when Tom Cech’s laboratory observed Group I introns acting as enzymes. This was shortly followed by the discovery of another ribozyme, Ribonulcease P, by Sid Altman’s laboratory. Both Cech and Altman received the Nobel Prize in chemistry in 1989 for their work on ribozymes.
Ribozymes can be...
Ribozymes can be...
Ribozymes
The term ribozyme is used for RNA that can act as an enzyme. Ribozymes are mainly found in selected viruses, bacteria, plant organelles, and lower eukaryotes. Ribozymes were first discovered in 1982 when Tom Cech’s laboratory observed Group I introns acting as enzymes. This was shortly followed by the discovery of another ribozyme, Ribonulcease P, by Sid Altman’s laboratory. Both Cech and Altman received the Nobel Prize in chemistry in 1989 for their work on ribozymes.
Ribozymes can be...
Ribozymes can be...
Eukaryotic RNA Polymerases
RNA Polymerase (RNAP) is conserved in all animals, with bacterial, archaeal, and eukaryotic RNAPs sharing significant sequence, structural, and functional similarities. Among the three eukaryotic RNAPs, RNA Polymerase II is most similar to bacterial RNAP in terms of both structural organization and folding topologies of the enzyme subunits. However, these similarities are not reflected in their mechanism of action.
All three eukaryotic RNAPs require specific transcription factors, of which the...
All three eukaryotic RNAPs require specific transcription factors, of which the...
Eukaryotic RNA Polymerases
RNA Polymerase (RNAP) is conserved in all animals, with bacterial, archaeal, and eukaryotic RNAPs sharing significant sequence, structural, and functional similarities. Among the three eukaryotic RNAPs, RNA Polymerase II is most similar to bacterial RNAP in terms of both structural organization and folding topologies of the enzyme subunits. However, these similarities are not reflected in their mechanism of action.
All three eukaryotic RNAPs require specific transcription factors, of which the...
All three eukaryotic RNAPs require specific transcription factors, of which the...
Ribosomal RNA Synthesis
Ribosome synthesis is a highly complex and coordinated process involving more than 200 assembly factors. The synthesis and processing of ribosomal components occurs not only in the nucleolus but also in the nucleoplasm and the cytoplasm of eukaryotic cells.
Ribosome biogenesis begins with the synthesis of 5S and 45S pre-rRNAs by distinct RNA polymerases. The primary transcripts are extensively processed and modified before they are bound and folded by ribosomal proteins and assembly factors,...
Ribosome biogenesis begins with the synthesis of 5S and 45S pre-rRNAs by distinct RNA polymerases. The primary transcripts are extensively processed and modified before they are bound and folded by ribosomal proteins and assembly factors,...
Bacterial RNA Polymerase
Unlike eukaryotes, bacteria use a single RNA Polymerase (RNAP) to transcribe all genes. The different subunits of bacterial RNAPhave distinct functions. The multisubunit structure of the bacterial RNAP helps the enzyme to maintain catalytic function, facilitate assembly, interact with DNA and RNA, and self-regulate its activity.
In most genes, the transcription site is a single base present upstream of the coding sequence. Though RNAP is a catalytically efficient enzyme, it does not recognize...
In most genes, the transcription site is a single base present upstream of the coding sequence. Though RNAP is a catalytically efficient enzyme, it does not recognize...

