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Updated: Jun 25, 2026

Quantitative Mass Spectrometric Profiling of Cancer-cell Proteomes Derived From Liquid and Solid Tumors
Published on: February 27, 2015
Proteomic global profiling for cancer biomarker discovery
Vitor Faca1, Hong Wang, Samir Hanash
1Fred Hutchinson Cancer Research Center, Seattle, WA, USA.
Cancer molecular diagnostics aim for simple tests using proteomics. This chapter presents methods for in-depth quantitative proteomic analysis to overcome challenges in identifying informative cancer markers.
Area of Science:
- Biomarkers
- Proteomics
- Molecular Diagnostics
Background:
- Cancer molecular diagnostics seek simple tests for risk prediction, early detection, tumor classification, and therapy monitoring.
- Proteomics offers a powerful approach for achieving these diagnostic goals.
- Significant challenges exist in identifying the most informative protein markers from complex proteomic data.
Purpose of the Study:
- To present advanced approaches for in-depth quantitative proteomic analysis.
- To address the challenges in identifying optimal cancer biomarkers using proteomics.
- To facilitate the development of simple and effective cancer molecular diagnostic tests.
Main Methods:
- Utilizing isotopic labeling techniques for quantitative proteomic measurements.
- Employing protein fractionation strategies to enhance proteomic depth and resolution.
- Applying advanced analytical methods for comprehensive proteomic profiling.
Main Results:
- Demonstrated feasibility of in-depth quantitative proteomic analysis.
- Highlighted the importance of isotopic labeling and fractionation for biomarker discovery.
- Provided a framework for overcoming key challenges in cancer proteomics.
Conclusions:
- Proteomics holds significant promise for advancing cancer molecular diagnostics.
- The presented methods offer solutions for robust biomarker identification.
- Further development in quantitative proteomics will accelerate the creation of novel cancer tests.
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