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Updated: Jun 24, 2026

A Bioinformatics Pipeline for Investigating Molecular Evolution and Gene Expression using RNA-seq
07:09

A Bioinformatics Pipeline for Investigating Molecular Evolution and Gene Expression using RNA-seq

Published on: May 28, 2021

Infernal 1.0: inference of RNA alignments

Eric P Nawrocki1, Diana L Kolbe, Sean R Eddy

  • 1HHMI Janelia Farm Research Campus, Ashburn, VA 20147, USA. nawrockie@janelia.hhmi.org

Bioinformatics (Oxford, England)
|March 25, 2009
PubMed
Summary

INFERNAL software builds RNA secondary structure profiles, known as covariance models (CMs). These models identify homologous RNAs and generate new sequence- and structure-based alignments in databases.

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