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Updated: Jun 23, 2026

Determination of the Gas-phase Acidities of Oligopeptides
Published on: June 24, 2013
Messenger-tagging electrosprayed ions: vibrational spectroscopy of suberate dianions
Daniel J Goebbert1, Torsten Wende, Risshu Bergmann
1Fritz-Haber-Institut der Max-Planck-Gesellschaft, Faradayweg 4-6, 14195 Berlin, Germany.
Abstract:
The gas-phase vibrational spectroscopy of bare and monohydrated suberate dianions, (-)OOC-(CH(2))(6)-COO(-) and (-)OOC-(CH(2))(6)-COO(-).H(2)O, is studied by infrared photodissociation aided by electronic structure calculations. To this end, the corresponding ion-Kr atom complexes are formed in a cooled buffer-gas-filled ion trap, and their infrared vibrational predissociation spectra are measured in the range from 660 to 3600 cm(-1). The water molecule binds to one of the two carboxylate groups in a bidentate fashion, characterized by the splitting of the carboxylate stretching bands, a substantially blue-shifted water bending band, and the presence of anomalously broadened bands in the O-H stretching and H(2)O rocking region. The C-C backbone structure remains unperturbed by the addition of a water molecule or a Kr atom. At 63 K, the all-trans isomer is the most abundant species, but evidence for dynamically interconverting conformers is also present from contributions to the absorption cross section on the low-energy tail of the C-H stretching region.
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