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Updated: Jun 23, 2026

Quantitative Polymerase Chain Reaction-based Analyses of Murine Intestinal Microbiota After Oral Antibiotic Treatment
Published on: November 17, 2018
Antibiotics suppress Cyp3a in the mouse liver by reducing lithocholic acid-producing intestinal flora
Takahiro Toda1, Kanna Ohi, Toshiyuki Kudo
1Department of Clinical Pharmacokinetics, Hoshi University, Tokyo, Japan.
Abstract:
We previously demonstrated that ciprofloxacin (CPX), a new quinolone antibiotic, suppresses Cyp3a in the mouse liver by reducing the hepatic level of lithocholic acid (LCA) produced by intestinal flora. The present study investigated the possibility that other antibiotics with antibacterial activity against LCA-producing bacteria also cause a decrease in the LCA level in the liver, leading to reduced expression of Cyp3a11. While the mRNA expression of Cyp3a11 in the liver was significantly reduced when SPF mice were administered antibiotics such as ampicillin, CPX, levofloxacin, or a combination of vancomycin and imipenem, no significant changes were observed after antibiotic treatment of GF mice lacking intestinal flora. LCA-producing bacteria in the feces as well as the hepatic level of the taurine conjugate of LCA were significantly reduced in the antibiotic-treated SPF mice, suggesting that the decrease in Cyp3a11 expression can be attributed to the reduction in LCA-producing intestinal flora following antibiotic administration. These results suggest that the administration of antibiotics with activity against LCA-producing bacteria can also cause a decrease in the LCA level in humans, which may lower CYP3A4 expression. The intestinal flora are reported to be altered not only by drugs, such as antibiotics, but also by stress, disease, and age. The findings of the present study suggest that these changes in intestinal flora could modify CYP expression and contribute to the individual differences in pharmacokinetics.
Insights
Antibiotic use can reduce liver lithocholic acid (LCA) by altering gut bacteria, leading to decreased Cyp3a expression. This suggests antibiotics may impact drug metabolism and individual pharmacokinetic differences.
Area of Science:
- Pharmacology
- Microbiology
- Drug Metabolism
Background:
- Cyp3a enzymes are crucial for drug metabolism in the liver.
- Intestinal bacteria produce lithocholic acid (LCA), which influences hepatic Cyp3a levels.
- Previous studies showed ciprofloxacin (CPX) reduces hepatic LCA and Cyp3a expression.
Purpose of the Study:
- To investigate if other antibiotics targeting LCA-producing bacteria also decrease hepatic LCA levels.
- To determine if this leads to reduced Cyp3a11 expression.
- To explore the impact of gut microbiota alterations on drug metabolism.
Main Methods:
- Administered various antibiotics (ampicillin, CPX, levofloxacin, vancomycin/imipenem) to specific-pathogen-free (SPF) and germ-free (GF) mice.
- Measured Cyp3a11 mRNA expression in the liver.
- Quantified LCA-producing bacteria in feces and hepatic taurine-conjugated LCA levels.
Main Results:
- Antibiotic administration significantly reduced Cyp3a11 mRNA expression in SPF mice but not in GF mice.
- LCA-producing bacteria and hepatic taurine-conjugated LCA levels decreased in antibiotic-treated SPF mice.
- These changes correlated with reduced Cyp3a11 expression, indicating a role for gut microbiota.
Conclusions:
- Antibiotics active against LCA-producing bacteria reduce hepatic LCA levels by altering gut microbiota.
- This reduction in LCA is linked to decreased Cyp3a11 expression in mice.
- Findings suggest potential impacts on human CYP3A4 expression and drug pharmacokinetics, highlighting the role of gut flora in drug response variability.
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