Related Experiment Video
Updated: Jun 23, 2026

Extraction and Analysis of Microbial Phospholipid Fatty Acids in Soils
Published on: August 26, 2016
pfaB products determine the molecular species produced in bacterial polyunsaturated fatty acid biosynthesis
Yoshitake Orikasa1, Mika Tanaka, Shinji Sugihara
1Laboratory of Environmental Molecular Biology, Faculty of Environmental Earth Science, Hokkaido University, Sapporo, Japan.
Abstract:
When pDHA4, a vector carrying all five pfaA-pfaE genes responsible for docosahexaenoic acid (DHA; 22:6) biosynthesis in Moritella marina MP-1, was coexpressed in Escherichia coli with the individual pfaA-pfaD genes for eicosapentaenoic acid (EPA; 20:5) biosynthesis from Shewanella pneumatophori SCRC-2738, both polyunsaturated fatty acids were synthesized only in the recombinant carrying pfaB for EPA synthesis. Escherichia coli coexpressing a deleted construct comprising pfaA, pfaC, pfaD and pfaE for EPA and pfaB for DHA produced EPA and DHA. Both EPA and DHA were detected in bacteria that inherently contained pfa genes for DHA. These results suggest that PfaB is the key enzyme determining the final product in EPA or DHA biosynthesis.
Insights
The enzyme PfaB is crucial for synthesizing both eicosapentaenoic acid (EPA) and docosahexaenoic acid (DHA) in bacteria. This key enzyme determines whether EPA or DHA is produced, impacting polyunsaturated fatty acid biosynthesis.
Area of Science:
- Microbiology
- Biochemistry
- Molecular Biology
Background:
- Polyunsaturated fatty acids (PUFAs) like EPA and DHA are vital nutrients.
- Microbial biosynthesis pathways offer a sustainable source of these fatty acids.
- Understanding the genetic basis of PUFA synthesis is key to optimizing production.
Purpose of the Study:
- To investigate the role of specific genes in the biosynthesis of eicosapentaenoic acid (EPA) and docosahexaenoic acid (DHA).
- To identify the key enzyme responsible for determining the final product (EPA or DHA) in microbial fatty acid synthesis.
Main Methods:
- Coexpression of genes involved in EPA and DHA biosynthesis pathways in Escherichia coli.
- Utilizing gene deletion constructs to assess the function of individual genes.
- Analysis of fatty acid profiles in recombinant E. coli strains.
Main Results:
- Coexpression of Moritella marina pfa genes for DHA and Shewanella pneumatophori pfa genes for EPA in E. coli resulted in PUFA synthesis.
- The presence of pfaB was essential for the synthesis of both EPA and DHA.
- Bacteria with inherent pfa genes for DHA also produced both EPA and DHA when PfaB was present.
Conclusions:
- The enzyme PfaB plays a pivotal role in the biosynthesis of both EPA and DHA.
- PfaB acts as a key determinant of the final polyunsaturated fatty acid product synthesized.
- This finding has significant implications for metabolic engineering of PUFA production in microorganisms.
Related Concept Videos
Biosynthesis of Lipids
Production of Antibiotics
Overview of Fatty Acid Metabolism
Fatty acids are catabolized in a process called beta-oxidation, which takes place in the matrix of the mitochondria and converts their fatty acid chains into two-carbon units of acetyl groups. The acetyl...
Lipid Catabolism

