Related Experiment Video
Updated: Jun 22, 2026

10:06
Engineering Artificial Factors to Specifically Manipulate Alternative Splicing in Human Cells
Published on: April 26, 2017
Alternative splicing as a therapeutic target for human diseases
Kenneth J Dery1, Veronica Gusti, Shikha Gaur
1Division of Molecular Biology, Beckman Research Institute of the City of Hope, Duarte, CA, USA.
Methods in Molecular Biology (Clifton, N.J.)
|June 5, 2009
Summary
Two RNA-based strategies, RNA interference (RNAi) and theophylline-responsive riboswitches, offer powerful tools for regulating gene expression. These methods aid in studying gene function and advancing drug discovery for diseases caused by splicing defects.
Area of Science:
- Molecular Biology
- Genetics
- Biotechnology
Background:
- Alternative splicing generates diverse protein isoforms from a single eukaryotic gene.
- Defective pre-mRNA splicing can lead to non-functional or toxic proteins, impacting cell homeostasis.
- Targeted gene regulation is crucial for understanding gene function and developing therapeutics.
Purpose of the Study:
- To present two RNA-based molecular tools for gene expression regulation.
- To demonstrate applications in loss-of-function and splicing modulation.
- To highlight their potential in studying gene function and drug discovery.
Main Methods:
- RNA interference (RNAi) for gene silencing (loss-of-function).
- Theophylline-responsive riboswitches for modulating alternative splicing.
- In vitro and/or in vivo experimental validation of these RNA-based strategies.
Main Results:
- Successful demonstration of RNAi for effective gene silencing.
- Effective regulation of alternative splicing using theophylline-responsive riboswitches.
- Validation of these RNA tools for studying gene function and disease mechanisms.
Conclusions:
- RNAi and riboswitches are versatile tools for gene expression control.
- These strategies offer therapeutic potential for diseases linked to splicing defects.
- Continued development of these RNA-based approaches will advance gene function studies and drug discovery.
Related Concept Videos
Alternative RNA Splicing
Alternative RNA splicing is the regulated splicing of exons and introns to produce different mature mRNAs from a single pre-mRNA. Unlike in constitutive splicing where a single gene produces a single type of mRNA, alternative splicing allows an organism to produce multiple proteins from a single gene and plays an important role in protein diversity.
There are five types of alternative RNA splicing that vary in the ways the pre-mRNA segments are removed or retained in the mature mRNA. The first...
There are five types of alternative RNA splicing that vary in the ways the pre-mRNA segments are removed or retained in the mature mRNA. The first...
Alternative RNA Splicing
Alternative RNA splicing is the regulated splicing of exons and introns to produce different mature mRNAs from a single pre-mRNA. Unlike in constitutive splicing where a single gene produces a single type of mRNA, alternative splicing allows an organism to produce multiple proteins from a single gene and plays an important role in protein diversity.
There are five types of alternative RNA splicing that vary in the ways the pre-mRNA segments are removed or retained in the mature mRNA. The first...
There are five types of alternative RNA splicing that vary in the ways the pre-mRNA segments are removed or retained in the mature mRNA. The first...
RNA Splicing
Splicing is the process by which eukaryotic RNA is edited before its translation into protein. The RNA strand transcribed from eukaryotic DNA is called the primary transcript. The primary transcripts that become mRNAs are called precursor messenger RNAs (pre-mRNAs). Eukaryotic pre-mRNA contains alternating sequences of exons and introns. Exons are nucleotide sequences that code for proteins, whereas introns are the non-coding regions. In RNA splicing, introns are removed and exons are bonded...
RNA Splicing
Splicing is the process by which eukaryotic RNA is edited before its translation into protein. The RNA strand transcribed from eukaryotic DNA is called the primary transcript. The primary transcripts that become mRNAs are called precursor messenger RNAs (pre-mRNAs). Eukaryotic pre-mRNA contains alternating sequences of exons and introns. Exons are nucleotide sequences that code for proteins, whereas introns are the non-coding regions. In RNA splicing, introns are removed and exons are bonded...
Exon Recombination
The evolution of new genes is critical for speciation. Exon recombination, also known as exon shuffling or domain shuffling, is an important means of new gene formation. It is observed across vertebrates, invertebrates, and in some plants such as potatoes and sunflowers. During exon recombination, exons from the same or different genes recombine and produce new exon-intron combinations, which might evolve into new genes.
Exon shuffling follows “splice frame rules.” Each exon has three reading...
Exon shuffling follows “splice frame rules.” Each exon has three reading...
CRISPR
Genome editing technologies allow scientists to modify an organism’s DNA via the addition, removal, or rearrangement of genetic material at specific genomic locations. These types of techniques could potentially be used to cure genetic disorders such as hemophilia and sickle cell anemia. One popular and widely used DNA-editing research tool that could lead to safe and effective cures for genetic disorders is the CRISPR-Cas9 system. CRISPR-Cas9 stands for Clustered Regularly Interspaced Short...
