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Repressing Gene Transcription by Redirecting Cellular Machinery with Chemical Epigenetic Modifiers
Published on: September 20, 2018
Mammalian Su(var) genes in chromatin control
Barna D Fodor1, Nicholas Shukeir, Gunter Reuter
1Max-Planck Institute of Immunobiology, D-79108 Freiburg, Germany. fodor@immunbio.mpg.de
Annual Review of Cell and Developmental Biology
|July 7, 2009
Summary
Genetic screens identified key genes regulating heterochromatin in Drosophila, conserved in mammals. These genes are crucial for epigenetic regulation and offer potential therapeutic targets for various human diseases.
Area of Science:
- Epigenetics
- Genetics
- Molecular Biology
Background:
- Genetic screens in Drosophila identified ~390 loci for position effect variegation and heterochromatin stabilization.
- Many identified genes, Suppressor of variegation [Su(var)] and Enhancer of variegation [E(var)], are conserved in mammals.
- Over 50 mammalian Su(var)/E(var) gene products localize to constitutive heterochromatin, with ~12 core components inferred.
Purpose of the Study:
- To investigate the role of Su(var) and E(var) genes in heterochromatin formation and epigenetic regulation.
- To explore the conservation and function of these genes in mammals.
- To identify potential therapeutic targets for human diseases linked to epigenetic misregulation.
Main Methods:
- Utilized genetic screens in Drosophila to identify genes involved in heterochromatin.
- Performed comparative genomics to assess conservation of identified genes in mammals.
- Analyzed protein localization and functional roles of Su(var)/E(var) gene products in mammalian heterochromatin.
Main Results:
- Identified approximately 390 loci in Drosophila related to heterochromatin.
- Confirmed conservation of many Su(var) and E(var) genes in mammals, with over 50 gene products localizing to constitutive heterochromatin.
- Discovered that additional Su(var) and E(var) factors dynamically interact with heterochromatin, partitioning the genome into active and repressed domains.
- Found a significant fraction of these factors are enzymes responsive to environmental/metabolic signals, influencing epigenetic state variation and propagation.
Conclusions:
- Mammalian Su(var) and E(var) genes are critical for maintaining chromatin structure and epigenetic states.
- Misregulation of these genes is implicated in human diseases, including cancer.
- Mammalian Su(var) and E(var) genes and their products represent promising targets for disease diagnosis and pharmaceutical intervention.
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Heterochromatin
The extent of chromatin compaction can be studied by staining chromatin using specific DNA binding dyes. Under the microscope, the dense-compacted regions that take up more dye are called heterochromatin. Heterochromatin is further classified into two forms – constitutive heterochromatin and facultative heterochromatin.
Constitutive heterochromatin: It is a highly compact region of chromatin that is mostly concentrated in the centromere and telomere. Unlike euchromatin, the amino acid at 9th...
Constitutive heterochromatin: It is a highly compact region of chromatin that is mostly concentrated in the centromere and telomere. Unlike euchromatin, the amino acid at 9th...
Heterochromatin
The extent of chromatin compaction can be studied by staining chromatin using specific DNA binding dyes. Under the microscope, the dense-compacted regions that take up more dye are called heterochromatin. Heterochromatin is further classified into two forms – constitutive heterochromatin and facultative heterochromatin.
Constitutive heterochromatin: It is a highly compact region of chromatin that is mostly concentrated in the centromere and telomere. Unlike euchromatin, the amino acid at 9th...
Constitutive heterochromatin: It is a highly compact region of chromatin that is mostly concentrated in the centromere and telomere. Unlike euchromatin, the amino acid at 9th...
Inheritance of Chromatin Structures
Epigenetics is the study of inherited changes in a cell's phenotype without changing the DNA sequences. It provides a form of memory for the differential gene expression pattern to maintain cell lineage, position-effect variegation, dosage compensation, and maintenance of chromatin structures such as telomeres and centromeres. For example, the structure and location of the centromere on chromosomes are epigenetically inherited. Its functionality is not dictated or ensured by the underlying DNA...
Euchromatin
The extent of chromatin compaction can be studied by staining chromatin using specific DNA binding dyes. Under the microscope, the dense-compacted regions take up more dye, appearing darker, while the less-compact areas take up less dye and appear lighter. Based on the compaction level, chromatins are classified into two primary forms – euchromatin and heterochromatin.
Euchromatin is the less dense region of the chromatin and stains lighter. Euchromatin contains histone H3 extensively...
Euchromatin is the less dense region of the chromatin and stains lighter. Euchromatin contains histone H3 extensively...
Euchromatin
The extent of chromatin compaction can be studied by staining chromatin using specific DNA binding dyes. Under the microscope, the dense-compacted regions take up more dye, appearing darker, while the less-compact areas take up less dye and appear lighter. Based on the compaction level, chromatins are classified into two primary forms – euchromatin and heterochromatin.
Euchromatin is the less dense region of the chromatin and stains lighter. Euchromatin contains histone H3 extensively...
Euchromatin is the less dense region of the chromatin and stains lighter. Euchromatin contains histone H3 extensively...
Chromatin Structure Regulates pre-mRNA Processing
In eukaryotic cells, nascent mRNA transcripts need to undergo many post-transcriptional modifications to reach the cell cytoplasm and translate into functional proteins. For a long time, transcription and pre-mRNA processing were considered two independent events that occur sequentially in the cell. However, it has now been well established that transcription and pre-mRNA processing are two simultaneous processes that are precisely regulated inside the cell.
The chromatin structure, especially...
The chromatin structure, especially...

