Related Experiment Video
Updated: Jun 21, 2026

Detection of Alternative Splicing During Epithelial-Mesenchymal Transition
Published on: October 9, 2014
Restriction analysis of otosclerosis-associated CD46 splicing variants
Péter Csomor1, Anita Szalmás, József Kónya
1Department of Otolaryngology Head and Neck Surgery, University of Debrecen Medical and Health Science Center, Nagyerdei krt. 98, Debrecen, 4032, Hungary.
Abstract:
Otosclerosis is a primary bone remodeling disorder of the human otic capsule and is associated with persistent measles virus infection. The human cellular receptor of measles virus is the membrane cofactor protein (MCP, CD46), which has 14 well-described splicing variants. Unique CD46 expression pattern of the otic capsule and the stapes footplate may determine the susceptibility for persistent measles virus infection. A total of 51 surgically removed ankylotic stapes footplates were analyzed by histopathological and molecular biological methods, respectively. Nucleic acids were extracted. Measles virus sequences were detected by nucleoprotein RNA-specific reverse transcriptase polymerase chain reaction (RT-PCR). Alternatively spliced RNA of CD46 isoforms was amplified by RT-PCR; cDNA amplimers were separated by SDS poly-acrylamide gel electrophoresis and were purified from the gel. Complementary DNA of CD46 isoforms was restricted by endonuclease enzymes having CD46-specific recognition sites. The presence of viral RNA was associated exclusively with the histopathological diagnosis of otosclerosis; the stapes specimens with negative measles virus belonged to non-otosclerotic stapes fixations. All specimens (N = 51) were characterized by the consecutive expression of five CD46 variants (c, d, e, f and one shorter unidentified isoform). Histologically confirmed ostosclerotic specimens (N = 21) were characterized by increased expression levels of variant "f" and the unknown isoform. Increased expression levels of these isoforms and special CD46 expression pattern of the human otic capsule might produce modified or pathological intracellular signalization that could create the possibility of persistent measles virus infection.
Insights
Otosclerosis, a bone disorder, is linked to persistent measles virus. Specific CD46 variants in the otic capsule may increase susceptibility to this viral infection.
Area of Science:
- Otolaryngology
- Virology
- Molecular Biology
Background:
- Otosclerosis is a bone remodeling disorder of the otic capsule.
- It is associated with persistent measles virus infection.
- Measles virus uses membrane cofactor protein (CD46) as its cellular receptor, with 14 known splicing variants.
Purpose of the Study:
- To investigate the association between measles virus infection and CD46 expression patterns in otosclerosis.
- To determine if specific CD46 variants contribute to persistent measles virus infection in the otic capsule.
Main Methods:
- Histopathological and molecular biological analysis of 51 surgically removed stapes footplates.
- Detection of measles virus RNA using RT-PCR.
- Amplification and analysis of CD46 isoform RNA, including gel electrophoresis and endonuclease digestion.
Main Results:
- Measles virus RNA was exclusively detected in histopathologically confirmed otosclerosis specimens.
- All 51 specimens expressed five CD46 variants (c, d, e, f, and an unidentified isoform).
- Otosclerotic specimens showed increased expression of CD46 variant "f" and the unidentified isoform.
Conclusions:
- The presence of measles virus RNA correlates with otosclerosis diagnosis.
- Specific CD46 expression patterns, particularly increased levels of variant "f" and the unidentified isoform, may facilitate persistent measles virus infection in the otic capsule.
- Altered intracellular signaling due to these CD46 variants might play a role in otosclerosis pathogenesis.
Related Concept Videos
RNA Splicing
Alternative RNA Splicing
There are five types of alternative RNA splicing that vary in the ways the pre-mRNA segments are removed or retained in the mature mRNA. The first...
