Related Experiment Video
Updated: Jun 21, 2026

12:13
Single-Molecule Imaging of Nuclear Transport
Published on: June 9, 2010
Quantification of nuclear protein transport using induced heterodimerization
Albert Busch1, Tilman Kiel, Stefan Hübner
1University of Würzburg, Institute of Anatomy and Cell Biology, Würzburg, Germany.
Traffic (Copenhagen, Denmark)
|July 16, 2009
Summary
Researchers developed a novel assay to measure protein movement between the cytoplasm and nucleus in living cells. This method uses a specific agent to control nuclear localization sequence (NLS) import and nuclear export sequence (NES) export.
Area of Science:
- Cell Biology
- Molecular Biology
- Biochemistry
Background:
- Nucleocytoplasmic transport is essential for eukaryotic cell function.
- Protein import and export are regulated by specific sequences like NLS and NES.
- Kinetically measuring these processes in real-time has been challenging.
Purpose of the Study:
- To adapt a protein heterodimerization assay for kinetic measurement of Crm1-mediated nuclear export.
- To investigate the use of AP21967 as a heterodimerizing agent for studying nucleocytoplasmic trafficking.
- To establish a non-invasive, time-saving method for quantitative analysis of protein transport.
Main Methods:
- Developed a protein heterodimerization assay using AP21967 and fusion proteins with NLS/NES.
- Utilized HeLa cells for live-cell imaging and kinetic analysis.
- Measured Crm1-mediated nuclear export and NLS-mediated nuclear import.
Main Results:
- Observed rapid nuclear export of NLS-containing fusion proteins induced by AP21967.
- Demonstrated that the extent of export correlated with the number of AP21967-binding motifs.
- Showed AP21967-induced export was inhibited by leptomycin B and half-maximal export occurred in ~10 min.
- Successfully studied induced NLS-mediated nuclear import using the same assay.
Conclusions:
- Induced protein heterodimerization is a versatile tool for quantitative study of nucleocytoplasmic protein trafficking.
- The developed assay allows for non-invasive, real-time kinetic measurements.
- This method offers a significant advancement in studying protein transport dynamics.
Related Concept Videos
Nuclear Protein Sorting
Nuclear protein sorting is the selective trafficking of histones, polymerases, gene regulatory proteins into the nucleus and exporting RNAs and ribosomes to the cytosol. It is a tightly controlled process that regulates gene expression within a cell.
Proteins targeted to the nucleus carry nuclear localization signals or NLS recognized by import receptors in the cytosol. Similarly, proteins with nuclear export signals are recognized by export receptors. Import and export receptors are...
Proteins targeted to the nucleus carry nuclear localization signals or NLS recognized by import receptors in the cytosol. Similarly, proteins with nuclear export signals are recognized by export receptors. Import and export receptors are...
Regulation of Nuclear Protein Sorting
Nuclear protein sorting regulates nucleus composition and gene expression, crucial for determining the fate of a eukaryotic cell. Hence, the entry and exit of molecules across the nuclear envelope is a tightly controlled process. Nuclear protein sorting can be inhibited by one of the following ways: 1) masking cargo signal sequences, 2) modifying the nuclear receptor's affinity for cargo, 3) controlling the nuclear pore size, 4) retaining the cargo during its transit to the cytosol or the...
Directionality of Nuclear Transport
Ras-related nuclear protein or Ran is a small G protein that cycles between its GTP and GDP bound states. Ran specific regulators, a Ran GTPase Activating Protein or RanGAP present in the cytosol and a Ran guanine nucleotide exchange factor or RanGEF present inside the nucleus regulate GTP/GDP exchange. A high concentration of GTP inside the cells, in addition to this asymmetric distribution of Ran-specific regulators, leads to a higher RanGTP concentration inside the nucleus. This...
Nuclear Export
The nucleus restricts several proteins within and allows others to pass. The restricted proteins possess a nuclear retention sequence or NRS, anchoring them to the nuclear lamins and preventing their transport to the cytosol. The non-restricted proteins, after their synthesis, are transported to their site of action, such as the cytosol or other organelles, with the help of nuclear export signals or NES.
NES are of three types- the canonical 10-residue long leucine-rich signal and other...
NES are of three types- the canonical 10-residue long leucine-rich signal and other...
Nuclear Localization Signals and Import
Proteins targeted to the nucleus carry short stretches of amino acid sequences called the nuclear localization signal or NLS. Classical nuclear localization signals are of two types: monopartite and bipartite NLS. Monopartite classical NLS (cNLS) consists of a single cluster of 4-8 amino acids. Bipartite cNLS consists of two clusters of 2-3 amino acids and a 9-12 residue long proline-rich linker bridging the two clusters. Signal clusters are rich in positively charged amino acids such as...
