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Atomic Force Microscopy Investigations of DNA Lesion Recognition in Nucleotide Excision Repair
Published on: May 24, 2017
ARF stimulates XPC to trigger nucleotide excision repair by regulating the repressor complex of E2F4
Carmen Dominguez-Brauer1, Yi-Ju Chen, Patrick M Brauer
1Department of Biochemistry and Molecular Genetics, University of Illinois, College of Medicine, M/C 669, 900 S. Ashland Avenue, Chicago, Illinois 60607, USA.
Abstract:
The tumour suppressor ARF (alternative reading frame), which is mutated or silenced in various tumours, has a crucial role in tumour surveillance to suppress unwarranted cell growth and proliferation. ARF has also been linked to the DNA-damage-induced response of p53 because of its ability to inhibit murine double minute 2 (MDM2). Here, however, we provide genetic evidence for a role of ARF in nucleotide excision repair (NER) that is independent of p53. Cells lacking ARF are deficient in NER. Expression of ARF restores the repair activity, which coincides with increased expression of the damaged-DNA recognition protein xeroderma pigmentosum, complementation group C (XPC). We provide evidence that, by disrupting the interaction between E2F transcription factor 4 (E2F4) and DRTF polypeptide 1 (DP1), ARF reduces the interaction of the E2F4-p130 repressor complex with the promoter of XPC to ensure high-level expression of XPC. Together, our results point to an important 'care-taker'-type tumour-suppression function for ARF in NER through the increased expression of XPC.
Insights
The tumour suppressor ARF plays a vital role in DNA repair through nucleotide excision repair (NER), independent of p53. Restoring ARF enhances NER activity by increasing XPC expression, crucial for cancer surveillance.
Area of Science:
- Molecular Biology
- Cancer Research
- Genetics
Background:
- The tumour suppressor ARF (alternative reading frame) is critical for preventing uncontrolled cell growth and is often mutated in cancers.
- ARF's known functions include inhibiting MDM2, linking it to the p53 DNA-damage response.
- A potential role in DNA repair mechanisms beyond p53 regulation remained unexplored.
Purpose of the Study:
- To investigate the role of ARF in DNA repair pathways, specifically nucleotide excision repair (NER).
- To determine if ARF's function in NER is dependent on or independent of the p53 pathway.
- To elucidate the molecular mechanism by which ARF influences NER activity.
Main Methods:
- Utilized genetic models lacking ARF to assess NER proficiency.
- Measured NER activity upon ARF re-expression.
- Analyzed the expression levels of key NER proteins, particularly XPC (xeroderma pigmentosum, complementation group C).
- Investigated the interaction between ARF, E2F4, DP1, and the XPC promoter using molecular assays.
Main Results:
- ARF-deficient cells exhibited a significant defect in nucleotide excision repair (NER).
- Restoration of ARF expression in these cells rescued NER deficiency.
- ARF re-expression correlated with increased expression of the DNA damage recognition protein XPC.
- ARF was found to disrupt the E2F4-DP1 complex, reducing its binding to the XPC promoter and thereby increasing XPC expression.
Conclusions:
- ARF possesses a p53-independent function in maintaining genomic stability through its role in NER.
- ARF acts as a 'care-taker' tumour suppressor by enhancing NER capacity via upregulation of XPC.
- These findings reveal a novel mechanism of tumour suppression mediated by ARF's direct involvement in DNA repair.
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