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Related Concept Videos

Protein Complex Assembly02:41

Protein Complex Assembly

Proteins can form homomeric complexes with another unit of the same protein or heteromeric complexes with different types.  Most protein complexes self-assemble spontaneously via ordered pathways, while some proteins need assembly factors that guide their proper assembly. Despite the crowded intracellular environment, proteins usually interact with their correct partners and form functional complexes.
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Protein Folding

Proteins are chains of amino acids linked together by peptide bonds. Upon synthesis, a protein folds into a three-dimensional conformation, critical to its biological function. Interactions between its constituent amino acids guide protein folding, and hence the protein structure is primarily dependent on its amino acid sequence.
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Detecting and Characterizing Protein Self-Assembly In Vivo by Flow Cytometry
05:58

Detecting and Characterizing Protein Self-Assembly In Vivo by Flow Cytometry

Published on: July 17, 2019

Self-assembly-induced protein crystallization.

Hongjun Liu1, Sanat K Kumar, Jack F Douglas

  • 1Department of Chemical Engineering, Columbia University, New York, New York 10027, USA.

Physical Review Letters
|August 8, 2009
PubMed
Summary
This summary is machine-generated.

Transient protein clusters, even outside thermodynamic stability, can drive crystal nucleation. The patchy nature of protein interactions facilitates self-assembly, guiding crystal formation and morphology.

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Area of Science:

  • Biophysics
  • Materials Science
  • Computational Chemistry

Background:

  • Protein clusters within liquid-liquid coexistence regions are known to promote crystal nucleation.
  • Recent experimental findings suggest protein nucleation can occur outside these phase boundaries.
  • Understanding the mechanisms of protein self-assembly and nucleation is crucial for controlling crystallization.

Purpose of the Study:

  • To investigate protein nucleation and crystal growth facilitated by transient clusters formed outside thermodynamic stability.
  • To explore the role of anisotropic interprotein interactions in protein self-assembly and nucleation.
  • To model protein crystallization using a minimal patchy particle system.

Main Methods:

  • Simulated a minimal model of patchy particles representing anisotropic interprotein interactions.
  • Investigated cluster formation and subsequent crystal nucleation under various thermodynamic conditions.
  • Analyzed the influence of particle patchiness on self-assembly and crystal morphology.

Main Results:

  • Transient protein clusters can nucleate crystal growth even when a dense protein liquid is thermodynamically unstable.
  • The patchy nature of interactions significantly enhances protein self-assembly.
  • Self-assembled clusters guide the morphology of the resulting protein crystals.

Conclusions:

  • Protein self-assembly into transient clusters is a key mechanism for nucleation, extending beyond traditional liquid-liquid coexistence boundaries.
  • Anisotropic interactions, modeled by patchy particles, are critical for facilitating this self-assembly and subsequent crystal formation.
  • This work provides insights into controlling protein crystallization through understanding interprotein interactions and self-assembly dynamics.