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A hands-on approach for fitting long-term survival models under the GAMLSS framework
Mário de Castro1, Vicente G Cancho, Josemar Rodrigues
1Universidade de São Paulo, Instituto de Ciências Matemáticas e de Computação, Caixa Postal 668, 13560-970, São Carlos-SP, Brazil. mcastro@icmc.usp.br
This study introduces generalized additive models for location, scale, and shape (GAMLSS) to accurately model long-term survival data, accounting for patients who will not experience the event. The approach utilizes a negative binomial distribution for competing risks and parameterizes the cured fraction for covariate analysis.
Area of Science:
- Biostatistics
- Survival Analysis
- Statistical Modeling
Background:
- Traditional survival models often fail with clinical data containing patients insusceptible to events.
- Ignoring non-susceptible patients leads to inadequate and potentially biased survival estimations.
- The presence of a 'cured' fraction necessitates specialized modeling techniques.
Purpose of the Study:
- To apply the generalized additive models for location, scale, and shape (GAMLSS) framework to long-term survival analysis.
- To develop a flexible statistical model that accommodates competing risks and a cured fraction.
- To demonstrate the utility of the `gamlss` package in R for fitting these complex survival models.
Main Methods:
- Utilized the GAMLSS framework for flexible statistical modeling.
- Modeled the number of competing causes of the event of interest using a negative binomial distribution.
- Parameterized the model based on the cured fraction, linking it to relevant covariates.
Main Results:
- The proposed GAMLSS approach effectively handles long-term survival data with a cured fraction.
- Several existing survival models are shown to be special cases of this generalized framework.
- The `gamlss` R package provides a robust platform for implementing and analyzing these models.
Conclusions:
- GAMLSS offers a powerful and flexible methodology for fitting long-term survival models, particularly when a cured fraction is present.
- The negative binomial distribution for competing risks enhances model adaptability.
- This framework provides a unified approach to modeling survival data with non-susceptible individuals.
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