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The TET family of proteins: functions and roles in disease
Adelene Y Tan1, James L Manley
1Department of Biological Sciences, Columbia University, New York, NY 10027, USA.
Abstract:
Translocated in liposarcoma, Ewing's sarcoma and TATA-binding protein-associated factor 15 constitute an interesting and important family of proteins known as the TET proteins. The proteins function in several aspects of cell growth control, including multiple different steps in gene expression, and they are also found mutated in a number of specific diseases. For example, all contain domains for binding nucleic acids and have been shown to function in both RNA polymerase II-mediated transcription and pre-mRNA splicing, possibly connecting these two processes. Chromosomal translocations in human sarcomas result in a fusion of the amino terminus of these proteins, which contains a transcription activation domain, to the DNA-binding domain of a transcription factor. Although the fusion proteins have been characterized in a clinical environment, the function of the cognate full-length protein in normal cells is a more recent topic of study. The first part of this review will describe the TET proteins, followed by detailed descriptions of their multiple roles in cells. The final sections will examine changes that occur in gene regulation in cells expressing the fusion proteins. The clinical implications and treatment of sarcomas will not be addressed but have recently been reviewed.
Insights
TET proteins, implicated in cell growth and gene expression, are crucial in normal cells and disease. Their roles in transcription and splicing, and alterations in fusion proteins, are key areas of study.
Area of Science:
- Molecular Biology
- Cell Biology
- Genetics
Background:
- TATA-binding protein-associated factor 15 (TAF15) and related proteins form the TET protein family.
- These proteins are vital for cell growth control, including gene expression.
- Mutations in TET proteins are associated with various diseases, and they are implicated in chromosomal translocations in sarcomas.
Purpose of the Study:
- To review the structure and function of TET proteins in normal cellular processes.
- To investigate the roles of TET proteins in gene expression, specifically transcription and splicing.
- To examine alterations in gene regulation resulting from fusion proteins involving TET proteins.
Main Methods:
- Literature review of existing studies on TET proteins.
- Analysis of protein domains involved in nucleic acid binding.
- Examination of gene expression patterns in cells with TET protein fusions.
Main Results:
- TET proteins possess nucleic acid-binding domains.
- They play roles in RNA polymerase II-mediated transcription and pre-mRNA splicing.
- Fusion proteins in sarcomas involve the N-terminal transcription activation domain and a DNA-binding domain.
Conclusions:
- TET proteins are multifunctional, impacting transcription and splicing.
- Understanding full-length TET protein function in normal cells is an emerging research area.
- Altered gene regulation by TET fusion proteins is a significant finding in sarcoma research.
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