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Updated: Jun 19, 2026

Multiplex PCR Assay for Typing of Staphylococcal Cassette Chromosome Mec Types I to V in Methicillin-resistant Staphylococcus aureus
Published on: September 5, 2013
Short term micro-evolution and PCR-detection of methicillin-resistant and -susceptible Staphylococcus aureus sequence
W J B van Wamel1, S Hansenová Manásková, A C Fluit
1ErasmusMC, Department of Medical Microbiology and Infectious Diseases, University Medical Centre Rotterdam, Rotterdam, The Netherlands. w.vanwamel@erasmusmc.nl
Micro-evolutionary analysis of Staphylococcus aureus sequence type 398 (ST 398) revealed significant genetic diversity within sub-clones. New PCR methods offer highly specific and sensitive detection of ST 398 isolates.
Area of Science:
- Microbiology
- Genetics
- Molecular Biology
Background:
- Staphylococcus aureus sequence type 398 (ST 398) is a significant pathogen.
- Understanding the micro-evolutionary dynamics of ST 398 is crucial for infection control.
Purpose of the Study:
- To analyze the micro-evolutionary diversity of ST 398 isolates.
- To develop novel diagnostic tools for ST 398 detection.
Main Methods:
- Pulsed-field gel electrophoresis (PFGE) with Cfr9I enzyme for micro-evolutionary analysis.
- Development and validation of specific Polymerase Chain Reaction (PCR) assays.
Main Results:
- PFGE identified three distinct sub-clones within the 70 ST 398 isolates.
- Significant heterogeneity in spa- and SCCmec-types was observed both between and within sub-clones.
- Developed PCRs demonstrated 100% specificity and high sensitivity for ST 398 detection.
Conclusions:
- ST 398 exhibits considerable micro-evolutionary diversity and genetic heterogeneity.
- The developed PCR assays are effective tools for accurate identification of ST 398 isolates.
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