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Updated: Jun 19, 2026

Unravelling the Function of a Bacterial Effector from a Non-cultivable Plant Pathogen Using a Yeast Two-hybrid Screen
Published on: January 20, 2017
Fungal effector proteins: past, present and future
Pierre J G M De Wit1, Rahim Mehrabi, Harrold A Van den Burg
1Wageningen University and Research Centre, Laboratory of Phytopathology, Droevendaalsesteeg 1, 6708 PB Wageningen, the Netherlands. pierre.dewit@wur.nl
Abstract:
The pioneering research of Harold Flor on flax and the flax rust fungus culminated in his gene-for-gene hypothesis. It took nearly 50 years before the first fungal avirulence (Avr) gene in support of his hypothesis was cloned. Initially, fungal Avr genes were identified by reverse genetics and map-based cloning from model organisms, but, currently, the availability of many sequenced fungal genomes allows their cloning from additional fungi by a combination of comparative and functional genomics. It is believed that most Avr genes encode effectors that facilitate virulence by suppressing pathogen-associated molecular pattern-triggered immunity and induce effector-triggered immunity in plants containing cognate resistance proteins. In resistant plants, effectors are directly or indirectly recognized by cognate resistance proteins that reside either on the plasma membrane or inside the plant cell. Indirect recognition of an effector (also known as the guard model) implies that the virulence target of an effector in the host (the guardee) is guarded by the resistance protein (the guard) that senses manipulation of the guardee, leading to activation of effector-triggered immunity. In this article, we review the literature on fungal effectors and some pathogen-associated molecular patterns, including those of some fungi for which no gene-for-gene relationship has been established.
Insights
Harold Flor's gene-for-gene hypothesis explains plant-pathogen interactions. Fungal avirulence genes encode effectors, crucial for understanding plant immunity and disease resistance.
Area of Science:
- Plant Pathology
- Molecular Genetics
- Mycology
Background:
- Harold Flor's gene-for-gene hypothesis established a framework for plant-pathogen interactions.
- Fungal avirulence (Avr) genes, identified nearly 50 years after the hypothesis, are key to understanding plant defense.
- Advances in genomics have accelerated the cloning and characterization of Avr genes.
Purpose of the Study:
- To review the literature on fungal effectors and pathogen-associated molecular patterns.
- To explore the mechanisms of effector-triggered immunity and the guard model.
- To discuss the cloning strategies for fungal Avr genes.
Main Methods:
- Review of existing scientific literature.
- Comparative genomics and functional genomics approaches for Avr gene identification.
- Analysis of effector-pathogen interactions and plant immune responses.
Main Results:
- Most Avr genes encode effectors that suppress plant immunity and induce effector-triggered immunity.
- Effectors are recognized by plant resistance proteins, either directly or indirectly via the guard model.
- The cloning of fungal Avr genes has advanced significantly due to genomic resources.
Conclusions:
- Fungal effectors play a critical role in virulence and host-pathogen interactions.
- Understanding effector function is essential for developing disease-resistant crops.
- The gene-for-gene concept remains a fundamental principle in plant pathology.
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