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Folding of tetrameric p53: oligomerization and tumorigenic mutations induce misfolding and loss of function
David J Lubin1, James S Butler, Stewart N Loh
1Department of Biochemistry and Molecular Biology, State University of New York Upstate Medical University, 750 East Adams Street, Syracuse, NY 13210, USA.
Abstract:
The physiologically active form of p53 consists of a tetramer of four identical 393-amino-acid subunits associated via their tetramerization domains (TDs; residues 325-355). One in two human tumors contains a point mutation in the DNA binding domain (DBD) of p53 (residues 94-312). Most existing studies on the effects of these mutations on p53 structure and function have been carried out on the isolated DBD fragment, which is monomeric. Recent structural evidence, however, suggests that DBDs may interact with each other in full-length tetrameric forms of p53. Here, we investigate the effects of tumorigenic DBD mutations on the folding of p53 in its tetrameric form. We employ the construct consisting of DBD and TD (amino acids 94-360). We characterize the stability and conformational state of the tumorigenic DBD mutants R248Q, R249S, and R282Q using equilibrium denaturation and functional assays. Destabilizing mutations cause DBD to misfold when it is part of the p53 tetramer, but not when it is monomeric. This conformation is populated under moderately destabilizing conditions (10 degrees C in 2 M urea, and at physiological temperature in the absence of denaturant). Under those same conditions, it is not present in the isolated DBD fragment or in the presence of the TD mutation L344P, which abolishes tetramerization. Misfolding appears to involve intramolecular DBD-DBD association within a single tetrameric molecule. This association is promoted by destabilization of DBD (caused by mutation or elevated temperature) and by the high local DBD concentration enforced by tetramerization of TD. Disrupting the nonnative DBD-DBD interaction or transiently inhibiting tetramerization and allowing p53 to fold as a monomer may be potential strategies for pharmacological intervention in cancer.
Insights
Cancer-related mutations in the p53 protein
Area of Science:
- Biochemistry
- Molecular Biology
- Structural Biology
Background:
- The tumor suppressor protein p53 is crucial for preventing cancer.
- Mutations in the DNA binding domain (DBD) of p53 are common in human tumors.
- Previous studies often used isolated, monomeric DBD fragments, potentially missing tetramer-specific effects.
Purpose of the Study:
- To investigate how cancer-associated mutations in the p53 DNA binding domain (DBD) affect the folding of full-length tetrameric p53.
- To characterize the stability and conformational changes of specific p53 mutants (R248Q, R249S, R282Q) within the tetrameric structure.
Main Methods:
- Used a p53 construct including the DNA binding domain (DBD) and tetramerization domain (TD).
- Employed equilibrium denaturation and functional assays to assess protein stability and conformation.
- Investigated mutants R248Q, R249S, and R282Q, and a TD mutant (L344P) that prevents tetramerization.
Main Results:
- Tumorigenic DBD mutations destabilize and cause misfolding of the DBD within the p53 tetramer, but not in isolated DBD fragments.
- This misfolding occurs under moderately destabilizing conditions and involves intramolecular DBD-DBD association.
- Misfolding is promoted by DBD destabilization and the high local concentration of DBDs within the tetramer.
Conclusions:
- Cancer-associated p53 DBD mutations can induce misfolding in the context of the tetrameric protein.
- This misfolding is driven by intramolecular interactions within the tetramer, exacerbated by mutation and tetramerization.
- Targeting these misfolding interactions or tetramerization could offer new cancer treatment strategies.
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