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Updated: Jun 18, 2026

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Mapping the Binding Site of an Aptamer on ATP Using MicroScale Thermophoresis
Published on: January 7, 2017
Label-free microfluidic characterization of temperature-dependent biomolecular binding
ThaiHuu Nguyen1, Renjun Pei, Donald Landry
1Department of Mechanical Engineering, Columbia University, New York, NY 10027, USA. tn2144@columbia.edu
Summary
This study introduces a novel microfluidic method to analyze temperature-dependent biomolecular binding without labeling. The technique characterizes ligand-receptor interactions across various temperatures, aiding biosensing and drug development.
Area of Science:
- Biochemistry
- Analytical Chemistry
- Biophysics
Background:
- Understanding temperature-dependent biomolecular interactions is crucial for various biological and medical applications.
- Current methods for characterizing these interactions can be complex and may require molecular labeling.
Purpose of the Study:
- To develop and validate a microfluidic approach for characterizing temperature-dependent biomolecular binding.
- To demonstrate the utility of this method for analyzing equilibrium binding profiles of different ligand-receptor systems.
Main Methods:
- A microfluidic chip was used to achieve equilibrium binding between surface-immobilized and solution-phase molecules at controlled temperatures.
- Unbound molecules were collected and analyzed using matrix-assisted laser desorption/ionization mass spectrometry (MALDI-MS).
Main Results:
- The microfluidic approach successfully generated temperature-dependent equilibrium binding profiles for adenosine monophosphate, platelet-derived growth factor, and arginine vasopressin with their aptamers.
- Identified distinct temperature zones where specific binding or dissociation occurred for each system.
- The method proved effective without requiring molecular labeling.
Conclusions:
- The developed microfluidic method offers a label-free, efficient way to characterize temperature-dependent biomolecular binding.
- This technique has potential applications in biosensing, biomolecular purification, and drug development by providing insights into binding thermodynamics.

