Genomewide association analysis of respiratory syncytial virus infection in mice

James M Stark1, M Michael Barmada, Abby V Winterberg

  • 1Department of Pediatrics, University of Texas Health Science Center, Houston, Texas, USA. starkj@childrensdayton.org

Journal of Virology
|December 18, 2009
PubMed

Insights

Individual susceptibility influences respiratory syncytial virus (RSV) severity. Genetic analysis identified a major quantitative trait locus, Rsvs1, on mouse chromosome 6, implicating the cystic fibrosis transmembrane conductance regulator (CFTR) gene in RSV infection outcomes.

Area of Science:

  • Genetics
  • Immunology
  • Virology

Background:

  • Respiratory syncytial virus (RSV) is a leading cause of infant lower respiratory tract infections, yet disease severity varies significantly among individuals.
  • Previous studies identified genetic differences in RSV susceptibility between AKR/J (susceptible) and C57BL/6J (resistant) mouse strains.
  • Mice lacking the cystic fibrosis transmembrane conductance regulator (CFTR) gene exhibit increased susceptibility to RSV infection.

Purpose of the Study:

  • To identify genetic factors contributing to individual differences in respiratory syncytial virus (RSV) disease severity.
  • To investigate the role of the cystic fibrosis transmembrane conductance regulator (CFTR) in modulating RSV infection outcomes.

Main Methods:

  • Quantitative trait locus (QTL) analysis was performed on recombinant backcross and F2 progeny derived from AKR/J and C57BL/6J mice infected with RSV.
  • Lung viral titers were measured to assess susceptibility.
  • Microarray analysis was used to compare lung gene expression profiles between parental strains during RSV infection.

Main Results:

  • A major QTL, designated Rsvs1, was identified on proximal mouse chromosome 6 in both recombinant populations.
  • Candidate genes within the Rsvs1 interval, including Cftr, were identified through microarray analysis.
  • These findings correlate genetic loci with differential RSV susceptibility and viral load.

Conclusions:

  • The study identified a significant genetic locus (Rsvs1) on mouse chromosome 6 associated with RSV susceptibility.
  • The cystic fibrosis transmembrane conductance regulator (CFTR) is strongly supported as a modifier gene influencing RSV infection severity.
  • Understanding these genetic factors provides insights into RSV pathogenesis and potential therapeutic targets, particularly for infants with cystic fibrosis.