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Simultaneous genome-wide association studies of anti-cyclic citrullinated peptide in rheumatoid arthritis using
Yanzhu Lin1, Min Zhang, Libo Wang
1Department of Statistics, Purdue University, West Lafayette, Indiana 47907, USA. YL: lin43@purdue.edu.
Abstract:
Genome-wide associations between single-nucleotide polymorphisms and clinical traits were simultaneously conducted using penalized orthogonal-components regression. This method was developed to identify the genetic variants controlling phenotypes from a massive number of candidate variants. By investigating the association between all single-nucleotide polymorphisms to the phenotype of antibodies against cyclic citrullinated peptide using the rheumatoid arthritis data provided by Genetic Analysis Workshop 16, we identified genetic regions which may contribute to the pathogenesis of rheumatoid arthritis. Bioinformatic analysis of these genomic regions showed most of them harbor protein-coding gene(s).
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