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Method for Identifying Small Molecule Inhibitors of the Protein-protein Interaction Between HCN1 and TRIP8b
Published on: November 11, 2016
The TRC8 ubiquitin ligase is sterol regulated and interacts with lipid and protein biosynthetic pathways
Jason P Lee1, Anne Brauweiler, Michael Rudolph
1Department of Medicine and Hollings Cancer Center, Medical University of South Carolina, Charleston, South Carolina, USA.
Abstract:
TRC8/RNF139 encodes an endoplasmic reticulum-resident E3 ubiquitin ligase that inhibits growth in a RING- and ubiquitylation-dependent manner. TRC8 also contains a predicted sterol-sensing domain. Here, we report that TRC8 protein levels are sterol responsive and that it binds and stimulates ubiquitylation of the endoplasmic reticulum anchor protein INSIG. Induction of TRC8 destabilized the precursor forms of the transcription factors SREBP-1 and SREBP-2. Loss of SREBP precursors was proteasome dependent, required a functional RING domain, occurred without generating processed nuclear forms, and suppressed SREBP target genes. TRC8 knockdown had opposite effects in sterol-deprived cells. In Drosophila, growth inhibition by DTrc8 was genetically suppressed by loss of specific Mprlp, Padlp N-terminal domain-containing proteins found in the COP9 signalosome and eIF3. DTrc8 genetically and physically interacted with two eIF3 subunits: eIF3f and eIF3h. Coimmunoprecipitation experiments confirmed these interactions in mammalian cells, and TRC8 overexpression suppressed polysome profiles. Moreover, high-molecular weight ubiquitylated proteins were observed in eIF3 immunoprecipitations from TRC8-overexpressing cells. Thus, TRC8 function may provide a regulatory link between the lipid and protein biosynthetic pathways.
Insights
TRC8, an E3 ubiquitin ligase, regulates sterol metabolism by destabilizing SREBP precursors. This endoplasmic reticulum protein links lipid and protein synthesis pathways.
Area of Science:
- Biochemistry
- Molecular Biology
- Cell Biology
Background:
- TRC8 (RNF139) is an endoplasmic reticulum-resident E3 ubiquitin ligase.
- TRC8 possesses a sterol-sensing domain and regulates cell growth.
- The precise mechanisms of TRC8's function in cellular pathways remain to be fully elucidated.
Purpose of the Study:
- To investigate the role of TRC8 in sterol metabolism and protein homeostasis.
- To determine the interaction partners and ubiquitylation targets of TRC8.
- To explore the functional consequences of TRC8 activity on transcription factors and protein synthesis.
Main Methods:
- Sterol response assays for TRC8 protein levels.
- Co-immunoprecipitation to identify binding partners.
- Ubiquitylation assays and proteasome activity assessment.
- Analysis of SREBP precursor and mature forms.
- Drosophila genetics and mammalian cell culture experiments.
- Polysome profiling and immunoprecipitation studies.
Main Results:
- TRC8 protein levels are sterol-responsive and it ubiquitylates INSIG.
- TRC8 induction destabilizes SREBP-1 and SREBP-2 precursors in a proteasome-dependent manner.
- TRC8 interacts with eIF3 subunits (eIF3f, eIF3h) in both Drosophila and mammalian cells.
- TRC8 overexpression inhibits protein synthesis, indicated by altered polysome profiles and ubiquitylated proteins associated with eIF3.
Conclusions:
- TRC8 acts as a sterol-responsive E3 ligase impacting lipid biosynthesis via SREBP regulation.
- TRC8's interaction with eIF3 suggests a role in coordinating protein synthesis with lipid metabolism.
- TRC8 may serve as a crucial regulatory link between lipid and protein biosynthetic pathways.
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