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Related Concept Videos

Cis-regulatory Sequences02:02

Cis-regulatory Sequences

Cis-regulatory sequences are short fragments of non-coding DNA that are present on the same chromosomes as the genes that they regulate. These fragments serve as binding sites for transcriptional regulators, proteins that are responsible for controlling gene transcription and differential gene expression across cell types in eukaryotes. Cis-regulatory sequences can be close to the gene of interest or thousands of bases away in the DNA sequence; however, those sequences that are further away are...
Gene Duplication and Divergence02:37

Gene Duplication and Divergence

The seminal work of Ohno in 1970 popularized the idea of gene duplication and divergence. DNA sequence comparison studies reveal that a large portion of the genes in bacteria, archaebacteria, and eukaryotes was  generated by gene duplication and divergence, indicating its critical role in evolution.
The duplicated copies of the gene are called Paralogs. Paralogs with similar sequences and functions form a gene family. Across several species, a large number of gene families are characterized.
Genetics of Speciation02:16

Genetics of Speciation

Speciation is the evolutionary process resulting in the formation of new, distinct species—groups of reproductively isolated populations.The genetics of speciation involves the different traits or isolating mechanisms preventing gene exchange, leading to reproductive isolation. Reproductive isolation can be due to reproductive barriers that have effects either before or after the formation of a zygote. Pre-zygotic mechanisms prevent fertilization from occurring, and post-zygotic mechanisms...
Gene Evolution - Fast or Slow?02:05

Gene Evolution - Fast or Slow?

The genomes of eukaryotes are punctuated by long stretches of sequence which do not code for proteins or RNAs. Although some of these regions do contain crucial regulatory sequences, the vast majority of this DNA serves no known function. Typically, these regions of the genome are the ones in which the fastest change, in evolutionary terms, is observed, because there is typically little to no selection pressure acting on these regions to preserve their sequences.
In contrast, regions which code...
Gene Evolution - Fast or Slow?02:05

Gene Evolution - Fast or Slow?

The genomes of eukaryotes are punctuated by long stretches of sequence which do not code for proteins or RNAs. Although some of these regions do contain crucial regulatory sequences, the vast majority of this DNA serves no known function. Typically, these regions of the genome are the ones in which the fastest change, in evolutionary terms, is observed, because there is typically little to no selection pressure acting on these regions to preserve their sequences.
In contrast, regions which code...
Osmoregulation in Fishes02:32

Osmoregulation in Fishes

When cells are placed in a hypotonic (low-salt) fluid, they can swell and burst. Meanwhile, cells in a hypertonic solution—with a higher salt concentration—can shrivel and die. How do fish cells avoid these gruesome fates in hypotonic freshwater or hypertonic seawater environments?

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Related Experiment Video

Updated: Jun 17, 2026

Manipulation of Gene Function in Mexican Cavefish
07:01

Manipulation of Gene Function in Mexican Cavefish

Published on: April 22, 2019

Genes, modules and the evolution of cave fish.

H Wilkens1

  • 1University of Hamburg, Biozentrum Grindel und Zoologisches Museum, Hamburg, Germany. Wilkens@uni-hamburg.de

Heredity
|January 14, 2010
PubMed
Summary

Regressive evolution in cavefish, like eye loss, is not driven by beneficial trait selection. Instead, distinct genetic modules controlling constructive and regressive traits inherit independently.

Area of Science:

  • Evolutionary biology
  • Genetics
  • Developmental biology

Background:

  • Cavefish are a key model for studying regressive evolution, particularly eye loss.
  • Theories propose regressive evolution results from pleiotropy (linked to beneficial traits) or neutral evolution.
  • Recent interest questions neutral evolution, suggesting pleiotropy drives regressive traits.

Purpose of the Study:

  • To review and integrate classical and molecular genetic studies of cavefish evolution.
  • To evaluate the pleiotropy theory against neutral evolution for regressive traits.
  • To elucidate the genetic mechanisms underlying eye regression in cavefish.

Main Methods:

  • Comparative analysis of classical and molecular genetic data in cavefish.
  • Examination of sequence data and eye size variation in surface-cavefish hybrids.

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Genome Editing in Astyanax mexicanus Using Transcription Activator-like Effector Nucleases (TALENs)

Published on: June 20, 2016

Behavioral Tracking and Neuromast Imaging of Mexican Cavefish
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Behavioral Tracking and Neuromast Imaging of Mexican Cavefish

Published on: April 6, 2019

Related Experiment Videos

Last Updated: Jun 17, 2026

Manipulation of Gene Function in Mexican Cavefish
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Manipulation of Gene Function in Mexican Cavefish

Published on: April 22, 2019

Genome Editing in Astyanax mexicanus Using Transcription Activator-like Effector Nucleases (TALENs)
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Genome Editing in Astyanax mexicanus Using Transcription Activator-like Effector Nucleases (TALENs)

Published on: June 20, 2016

Behavioral Tracking and Neuromast Imaging of Mexican Cavefish
14:58

Behavioral Tracking and Neuromast Imaging of Mexican Cavefish

Published on: April 6, 2019

  • Review of studies on hedgehog gene expression and genetic crossing experiments.
  • Main Results:

    • No strong evidence suggests destructive mutations in structural eye genes.
    • Hedgehog genes, implicated in eye size reduction, show no mutations.
    • Unidentified 'eye genes' and their interaction with hedgehog appear responsible for eye regression.
    • Recombination of these 'eye genes' in hybrids can restore eye development.
    • Constructive and regressive traits exhibit independent inheritance patterns.

    Conclusions:

    • Eye regression in cavefish is likely driven by mutations in specific 'eye genes', not pleiotropy linked to beneficial traits.
    • The genetic basis of regressive evolution involves independent genetic modules.
    • The pleiotropy theory for regressive evolution in cavefish is not supported by current evidence.