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Updated: Jun 16, 2026

Evaluation of Caspase Activation to Assess Innate Immune Cell Death
Published on: January 20, 2023
Interaction with Sug1 enables Ipaf ubiquitination leading to caspase 8 activation and cell death
Yatender Kumar1, Vegesna Radha, Ghanshyam Swarup
1Centre for Cellular and Molecular Biology, Council of Scientific and Industrial Research (CSIR), Uppal Road, Hyderabad 500007, India.
Abstract:
Activation of initiator caspases is dependent on interacting proteins, and Ipaf [ICE (interleukin-1beta-converting enzyme)-protease activating factor] {NLRC4 [NLR (Nod-like receptor) family CARD (caspase activation and recruitment domain)-containing 4]} an inflammasome component, is involved in caspase 1 activation and apoptosis. Investigating the mechanisms of Ipaf activation, we found that the C-terminal LRR (leucine-rich repeat) domain of Ipaf, through intramolecular interaction, negatively regulates its apoptosis-inducing function. In A549 lung carcinoma cells, expression of Ac-Ipaf (LRR-domain-deleted Ipaf) induced cell death that was dependent on caspase 8, but not on caspase 1. A yeast two-hybrid screen using Ac-Ipaf as bait identified human Sug1 (suppressor of gal 1), a component of the 26S proteasome, as an interacting protein. In mammalian cells Sug1 interacts and co-localizes with Ipaf. Sug1 binds to amino acids 91-253 of Ipaf, which is also the region that the LRR domain binds to. It potentiates cell death induced by Ipaf and Ac-Ipaf, and co-expression of Sug1 and Ipaf induces caspase-8-dependent cell death. Cellular complexes formed by Ipaf and Sug1 contain caspase 8. Expression of Ac-Ipaf or co-expression of Sug1 with Ipaf results in the formation of cytoplasmic aggregates and caspase 8 activation. Sug1 co-expression enabled modification of Ipaf by ubiquitination. Tagging ubiquitin molecules to Ipaf led to aggregate formation, enhanced caspase 8 interaction and activation, resulting in induction of cell death. Using RNAi (RNA interference) and dominant-negative approaches, we have shown that cell death induced by Ac-Ipaf expression or by treatment with TNF-alpha (tumour necrosis factor alpha) or doxorubicin is dependent on Sug1. Our results suggest a role for ubiquitination of Ipaf that is enabled by its interaction with Sug1, leading to caspase 8 activation and cell death.
Insights
The inflammasome component Ipaf (NLRC4) negatively regulates apoptosis. Its interaction with Sug1 (proteasome) and subsequent ubiquitination activate caspase 8, inducing cell death.
Area of Science:
- Cellular Biology
- Immunology
- Molecular Mechanisms of Cell Death
Background:
- Initiator caspase activation relies on protein interactions.
- Ipaf (NLRC4) is an inflammasome component involved in caspase 1 activation and apoptosis.
- The C-terminal LRR domain of Ipaf negatively regulates its apoptosis-inducing function via intramolecular interaction.
Purpose of the Study:
- To investigate the mechanisms of Ipaf activation.
- To elucidate the role of Sug1 in Ipaf-mediated cell death.
- To understand the involvement of ubiquitination in Ipaf function.
Main Methods:
- Yeast two-hybrid screening to identify Ipaf interacting proteins.
- Expression of LRR-domain-deleted Ipaf (Ac-Ipaf) in A549 lung carcinoma cells.
- Co-immunoprecipitation and co-localization studies in mammalian cells.
- RNA interference (RNAi) and dominant-negative approaches.
- Ubiquitination assays.
Main Results:
- Ac-Ipaf expression induced caspase-8-dependent cell death, independent of caspase 1.
- Sug1, a 26S proteasome component, interacts with and potentiates Ipaf- and Ac-Ipaf-induced cell death.
- Sug1 co-expression with Ipaf or Ac-Ipaf leads to cytoplasmic aggregate formation, caspase 8 activation, and ubiquitination of Ipaf.
- Cell death induced by Ac-Ipaf, TNF-alpha, or doxorubicin is dependent on Sug1.
Conclusions:
- The C-terminal LRR domain of Ipaf negatively regulates its apoptotic function.
- Interaction with Sug1 facilitates Ipaf ubiquitination, leading to caspase 8 activation and cell death.
- Sug1 plays a crucial role in Apaf-mediated apoptosis and in cell death pathways induced by TNF-alpha and doxorubicin.
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