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"Cell Surface Capture" Workflow for Label-Free Quantification of the Cell Surface Proteome
Published on: March 24, 2023
Quantitative cell surface proteome profiling for SigB-dependent protein expression in the human pathogen
Kristina Hempel1, Jan Pané-Farré, Andreas Otto
1Institute for Microbiology, Ernst-Moritz-Arndt-University Greifswald, Greifswald, Germany.
Journal of Proteome Research
|January 30, 2010
Summary
This study quantifies Staphylococcus aureus cell surface proteins and reveals that the sigma B (SigB) factor significantly influences their expression, identifying new SigB-modulated surface proteins and virulence factors.
Area of Science:
- Microbiology
- Proteomics
- Molecular Biology
Background:
- Staphylococcus aureus virulence factors are often cell surface-associated or secreted.
- Understanding the cell surface proteome is crucial for S. aureus pathophysiology.
- The alternative sigma factor sigma B (SigB) is hypothesized to influence surface protein expression.
Purpose of the Study:
- To perform a global and quantitative analysis of S. aureus cell surface-associated proteins.
- To investigate the impact of the sigma B (SigB) factor on the expression of these surface proteins.
- To identify novel SigB-modulated surface proteins and potential virulence factors.
Main Methods:
- Utilized (14)N/(15)N metabolic labeling, biotinylation, and GeLC-MS/MS for quantitative proteomic analysis.
- Compared the methicillin-resistant S. aureus (MRSA) wild-type strain COL with its sigB mutant.
- Analyzed proteins from both growing and non-growing cell states.
Main Results:
- Quantified a total of 296 cell surface-associated proteins.
- Identified 49 surface-associated proteins modulated by SigB, with 21 previously known.
- Observed more down-regulated (31) than up-regulated (18) proteins in the sigB mutant, and discovered 28 novel SigB-influenced surface proteins.
Conclusions:
- SigB significantly modulates the S. aureus surface proteome, impacting numerous cell surface proteins.
- This study expands the known repertoire of SigB-regulated surface proteins and potential virulence factors.
- The findings provide new insights into S. aureus virulence mechanisms and SigB regulation.

