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Bacterial Artificial Chromosomes: A Functional Genomics Tool for the Study of Positive-strand RNA Viruses
Published on: December 29, 2015
A host Ca2+/Mn2+ ion pump is a factor in the emergence of viral RNA recombinants
Hannah M Jaag1, Judit Pogany, Peter D Nagy
1Department of Plant Pathology, University of Kentucky, Plant Science Building, Lexington, KY 40546, USA.
Abstract:
Viruses change rapidly due to genetic mutations, and viral RNA recombination in RNA viruses can lead to the emergence of drug-resistant or highly virulent strains. Here, we report that host Pmr1p, an ion pump that controls Ca2+/Mn2+ influx into the Golgi from the cytosol, affects the frequency of viral RNA recombination and the efficiency of replication. Inactivation of PMR1 leads to an approximately 160-fold increase in RNA recombination of Tomato bushy stunt virus (TBSV) in yeast, a model host. Expression of separation-of-function mutants of Pmr1p reveals that the ability of Pmr1p to control the Mn2+ concentration in the cytosol is a key factor in viral RNA recombination. Indeed, a high Mn2+ concentration in a cell-free TBSV replication system increases the recombination frequency, and knockdown of Ca2+/Mn2+ exporters in plants increases virus replication and RNA recombination. Thus, a conserved host protein could affect the adaptive evolution of RNA viruses.
Insights
Host protein Pmr1p influences viral RNA recombination and replication. Its role in regulating manganese (Mn2+) levels is key to controlling viral evolution and the emergence of new strains.
Area of Science:
- Virology
- Molecular Biology
- Host-Pathogen Interactions
Background:
- RNA viruses rapidly evolve through mutation and recombination.
- Emergence of drug-resistant or highly virulent viral strains is a significant public health concern.
- Host factors play a crucial role in modulating viral evolution.
Purpose of the Study:
- To investigate the role of host Pmr1p, a Golgi ion pump, in viral RNA recombination and replication.
- To determine the specific contribution of Pmr1p's ion transport function to viral RNA recombination frequency.
Main Methods:
- Utilized yeast as a model host for Tomato bushy stunt virus (TBSV) RNA recombination studies.
- Employed separation-of-function mutants of Pmr1p to dissect its functional domains.
- Established a cell-free TBSV replication system to assess the impact of manganese (Mn2+) concentration.
- Investigated the effects of Ca2+/Mn2+ exporter knockdown in plants on virus replication and recombination.
Main Results:
- Inactivation of the host gene PMR1 resulted in a ~160-fold increase in TBSV RNA recombination in yeast.
- Pmr1p's ability to regulate cytosolic Mn2+ concentration was identified as critical for viral RNA recombination.
- Elevated Mn2+ levels in a cell-free system significantly increased TBSV recombination frequency.
- Knockdown of Ca2+/Mn2+ exporters in plants enhanced both TBSV replication and RNA recombination.
Conclusions:
- The conserved host protein Pmr1p significantly impacts viral RNA recombination and replication efficiency.
- Cytosolic manganese (Mn2+) concentration, regulated by Pmr1p, is a key determinant of viral RNA recombination.
- Host ion homeostasis mechanisms represent potential targets for controlling RNA virus adaptive evolution.
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