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Published on: January 12, 2020
Practical application of bioinformatics by the multidisciplinary VIZIER consortium
Alexander E Gorbalenya1, Philippe Lieutaud, Mark R Harris
1Molecular Virology Laboratory, Department of Medical Microbiology, Center for Infectious Diseases, Leiden University Medical Center, P.O. Box 9600, E4-P, 2300 RC Leiden, The Netherlands. A.E.Gorbalenya@lumc.nl
The VIZIER project utilized bioinformatics tools to identify and validate antiviral targets in RNA viruses. This approach facilitated the development of prototype drugs against a wide range of viral pathogens.
Area of Science:
- Bioinformatics
- Virology
- Structural Genomics
Background:
- RNA viruses, including HIV, Influenza, and Hepatitis C, pose significant threats to human and animal health.
- Emerging and re-emerging viral infections necessitate the development of broad-spectrum antiviral therapies.
- The VIZIER consortium aimed to address the challenge of developing antiviral drugs against diverse RNA virus lineages.
Purpose of the Study:
- To review the bioinformatics technologies applied by the VIZIER consortium.
- To demonstrate how these technologies supported the project's objectives in comparative structural genomics of viral enzymes.
- To highlight the role of bioinformatics in advancing antiviral drug discovery.
Main Methods:
- Bioinformatics-mediated selection of RNA viruses.
- Prediction of viral protein targets for drug development.
- Analysis of 3D protein structures and antiviral compound interactions.
- Information flow management within a multidisciplinary consortium.
Main Results:
- Bioinformatics technologies provided integrated solutions for project advancement.
- Facilitated the identification and validation of numerous RNA virus targets.
- Enabled a comprehensive approach to antiviral therapy development.
- Established a communication framework for complex research endeavors.
Conclusions:
- The VIZIER project successfully leveraged bioinformatics for RNA virus target identification.
- The applied technologies were crucial for the timely advancement of antiviral research.
- This multidisciplinary approach is vital for developing a robust pipeline of antiviral drugs.
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