Related Experiment Video
Updated: Jun 15, 2026

12:36
Single-cell Analysis of Immunophenotype and Cytokine Production in Peripheral Whole Blood via Mass Cytometry
Published on: June 26, 2018
A genomic approach to human autoimmune diseases.
Virginia Pascual1, Damien Chaussabel, Jacques Banchereau
1Baylor Institute for Immunology Research, INSERM U, Dallas, Texas 75204, USA. Virginip@baylorhealth.edu
Annual Review of Immunology
|March 3, 2010
Summary
DNA microarrays enable genome-wide RNA analysis, advancing personalized medicine in cancer and autoimmune diseases. Future high-throughput methods will make transcriptome analysis a clinical standard.
Area of Science:
- Genomics
- Molecular Biology
- Translational Medicine
Background:
- DNA-based microarrays have significantly advanced genome-wide RNA abundance assessment over the past decade.
- Medical applications, particularly in cancer, have led to personalized therapeutic strategies.
- Transcriptome analysis in blood holds promise for understanding various diseases.
Purpose of the Study:
- To review the applications of DNA microarrays in medical research, focusing on cancer and autoimmune diseases.
- To highlight the potential of transcriptome analysis for identifying therapeutic targets and biomarkers.
- To discuss the future of high-throughput RNA profiling in clinical settings.
Main Methods:
- Genome-wide RNA abundance assessment using DNA-based microarrays.
- Analysis of solid tumors and hematological malignancies.
- Transcriptome profiling in blood for various diseases, including autoimmune conditions.
Main Results:
- Microarray studies have informed personalized therapeutic options in cancer.
- Blood transcriptome analysis shows potential for biomarker discovery in autoimmune diseases (diagnosis, activity assessment, treatment response).
- Emerging high-throughput RNA profiling methods offer increased sensitivity and quantification.
Conclusions:
- DNA microarrays have revolutionized RNA analysis, impacting personalized medicine.
- Transcriptome analysis is a promising tool for autoimmune disease research and clinical application.
- Advancements in high-throughput RNA profiling are expected to integrate transcriptome analysis into routine clinical practice within the next decade.
Related Concept Videos
Autoimmune Disorders
Autoimmune diseases are a group of disorders in which the body's immune system mistakenly attacks its own cells, tissues, and organs. This results from an overactive immune response against substances and tissues normally present in the body. Let's delve into the concept and mechanism of autoimmune diseases from an immune system point of view, explore different causes and examples of such diseases, and discuss potential solutions.
Concept and Mechanism of Autoimmune Diseases
The immune system...
Concept and Mechanism of Autoimmune Diseases
The immune system...
Genome-wide Association Studies-GWAS
Genome-wide association studies or GWAS are used to identify whether common SNPs are associated with certain diseases. Suppose specific SNPs are more frequently observed in individuals with a particular disease than those without the disease. In that case, those SNPs are said to be associated with the disease. Chi-square analysis is performed to check the probability of the allele likely to be associated with the disease.
GWAS does not require the identification of the target gene involved in...
GWAS does not require the identification of the target gene involved in...
Pharmacogenomics: Identification of New Drug Targets
Advances in genomics have profoundly influenced drug discovery by increasing both the speed and accuracy of pharmaceutical development. Pharmacogenomics, which examines how genetic variation influences drug response, facilitates the identification of novel therapeutic targets and enables patient stratification for personalized treatment. These strategies contribute to improved drug efficacy, minimized adverse effects, and more efficient clinical trial design.Mapping genetic differences...
Human Virome
The human body harbors a vast and diverse viral community known as the human virome. The virome includes bacteriophages that infect bacteria, and eukaryotic viruses that infect human cells. Transient dietary and environmental viruses also contribute to this dynamic ecosystem. Estimates suggest the human body may contain on the order of 10¹³ viral particles, though abundance varies widely by body site and detection method.Comprehensive characterization of the virome has become possible only with...
Human Genetics
Human genetics provides a profound framework for understanding the interplay between genetic predispositions and human psychology. At the heart of this discipline lies the study of how genes influence physical traits, behaviors, and susceptibility to diseases. Each person carries a unique genetic code that subtly or significantly shapes their psychological and behavioral landscape.
The complex relationship between genetics and psychology is observable through common biological components such...
The complex relationship between genetics and psychology is observable through common biological components such...
Genomics
Genomics is the science of genomes: it is the study of all the genetic material of an organism. In humans, the genome consists of information carried in 23 pairs of chromosomes in the nucleus, as well as mitochondrial DNA. In genomics, both coding and non-coding DNA is sequenced and analyzed. Genomics allows a better understanding of all living things, their evolution, and their diversity. It has a myriad of uses: for example, to build phylogenetic trees, to improve productivity and...
