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G2-seq: A High Throughput Sequencing-based Technique for Identifying Late Replicating Regions of the Genome
Published on: March 22, 2018
Early initiation of a replication origin tethered at the nuclear periphery
Hani Ebrahimi1, E Douglas Robertson, Angela Taddei
1Institute of Medical Sciences, University of Aberdeen, Foresterhill, Aberdeen AB25 2ZD, UK.
Journal of Cell Science
|March 4, 2010
Summary
Artificial tethering of early replication origins to the nuclear periphery does not delay their replication timing in yeast. This suggests peripheral positioning alone does not dictate late replication.
Area of Science:
- Cell Biology
- Molecular Biology
- Genetics
Background:
- Peripheral nuclear localization of chromosomal loci is associated with late DNA replication.
- The relationship between nuclear positioning and replication timing is not fully understood.
Purpose of the Study:
- To investigate whether artificial tethering of an early-initiating replication origin to the nuclear periphery delays its replication time in budding yeast.
- To determine if peripheral positioning can impose late replication.
Main Methods:
- Artificial tethering of the early replication origin ARS607 to the nuclear periphery using Yif1, Sir4 fragment, or Yku80 constructs.
- Dense-isotope transfer method to assess replication time.
- Single-cell microscopy to analyze nuclear positioning.
Main Results:
- ARS607 replicated early even when tethered to the nuclear periphery via Yif1 or Sir4.
- Tethering via Yku80 caused only a slight delay in ARS607 replication.
- No correlation was observed between peripheral positioning and delayed replication in individual cells.
Conclusions:
- Artificial relocation of an early replication origin to the nuclear periphery does not necessarily delay its replication.
- Replication timing is not solely determined by nuclear periphery localization.
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