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Updated: Jun 14, 2026

Identification of Rare Bacterial Pathogens by 16S rRNA Gene Sequencing and MALDI-TOF MS
Published on: July 11, 2016
Microbacterium mitrae sp. nov., isolated from salted turban shell.
Yun-Ji Kim1, Seong Woon Roh1, Mi-Ja Jung1
1Department of Life and Nanopharmaceutical Sciences and Department of Biology, Kyung Hee University, Seoul 130-701, Republic of Korea.
A novel bacterium, Microbacterium mitrae sp. nov., was identified from Korean fermented food. This yellow-pigmented, salt-tolerant bacterium represents a new species within the Microbacterium genus.
Area of Science:
- Microbiology
- Bacteriology
- Food Science
Background:
- Microbacterium species are known for their presence in diverse environments, including fermented foods.
- Salted turban shell is a traditional Korean fermented food product.
Purpose of the Study:
- To isolate and characterize a novel bacterium from salted turban shell.
- To determine the taxonomic position of the novel isolate within the genus Microbacterium.
Main Methods:
- Morphological, physiological, and biochemical characterization of the bacterial strain.
- 16S rRNA gene sequencing for phylogenetic analysis.
- DNA-DNA hybridization and chemotaxonomic analysis for species delineation.
Main Results:
- A novel Gram-positive, non-motile, non-spore-forming rod, designated strain M4-8(T), was isolated.
- The strain exhibited yellow-pigmented colonies and tolerance to 0-8% NaCl, with optimal growth at 1% NaCl and 30°C.
- Phylogenetic analysis showed 97.8% 16S rRNA gene similarity to Microbacterium hominis, but low DNA-DNA relatedness (<29%) confirmed it as a new species.
- Major fatty acids were iso-C15:0 and anteiso-C15:0; ornithine was the major cell-wall diamino acid.
Conclusions:
- Strain M4-8(T) represents a novel species within the genus Microbacterium, proposed as Microbacterium mitrae sp. nov.
- The unique characteristics and low DNA-DNA relatedness support its classification as a distinct species.
- This finding expands the known diversity of Microbacterium in fermented food ecosystems.
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