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Updated: Jun 14, 2026

Selecting Multiple Biomarker Subsets with Similarly Effective Binary Classification Performances
Published on: October 11, 2018
VARIABLE SELECTION FOR REGRESSION MODELS WITH MISSING DATA
Ramon I Garcia1, Joseph G Ibrahim, Hongtu Zhu
1Department of Biostatistics, University of North Carolina School of Public Health, McGavran Greenberg Hall, Chapel Hill, North Carolina 27599, U.S.A.
Abstract:
We consider the variable selection problem for a class of statistical models with missing data, including missing covariate and/or response data. We investigate the smoothly clipped absolute deviation penalty (SCAD) and adaptive LASSO and propose a unified model selection and estimation procedure for use in the presence of missing data. We develop a computationally attractive algorithm for simultaneously optimizing the penalized likelihood function and estimating the penalty parameters. Particularly, we propose to use a model selection criterion, called the IC(Q) statistic, for selecting the penalty parameters. We show that the variable selection procedure based on IC(Q) automatically and consistently selects the important covariates and leads to efficient estimates with oracle properties. The methodology is very general and can be applied to numerous situations involving missing data, from covariates missing at random in arbitrary regression models to nonignorably missing longitudinal responses and/or covariates. Simulations are given to demonstrate the methodology and examine the finite sample performance of the variable selection procedures. Melanoma data from a cancer clinical trial is presented to illustrate the proposed methodology.
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