Related Experiment Video
Updated: Jun 14, 2026

Synchronization of Caulobacter Crescentus for Investigation of the Bacterial Cell Cycle
Published on: April 8, 2015
An epigenetic switch governing daughter cell separation in Bacillus subtilis
Yunrong Chai1, Thomas Norman, Roberto Kolter
1Department of Molecular and Cellular Biology, Harvard University, Cambridge, Massachusetts 02138, USA.
This study explores how cells of Bacillus subtilis switch between being motile and non-motile. The researchers found that two proteins, SinR and SlrR, work together in a feedback loop to control this switch. When active, this system keeps genes for cell separation and motility turned off. The findings suggest that this mechanism could explain the two distinct cell states observed in this bacterium.
Area of Science:
- Molecular microbiology
- Epigenetic regulation in prokaryotes
Background:
Bacillus subtilis cells exist in two distinct states: motile, individual cells and non-motile chains. This division is controlled by genes for cell separation and motility. Prior research has shown that these genes are either ON or OFF. However, the mechanism behind this switch remained unclear. No prior work had resolved how this ON/OFF state is regulated. Understanding this process is important for microbial physiology. Researchers sought to uncover the regulatory system behind this bistability. This gap motivated the current study. The goal was to identify the proteins involved in this genetic switch.
Purpose Of The Study:
The study aimed to determine how the ON/OFF switch for cell separation and motility is controlled in Bacillus subtilis. The researchers focused on the role of the SinR and SlrR proteins. They hypothesized that these proteins regulate the expression of motility and separation genes. The authors propose that a feedback loop involving these proteins governs the switch. This mechanism may explain the bistable states observed in the cells. The study sought to test this hypothesis experimentally. The findings could clarify how bacterial cells transition between motile and non-motile states. This work addresses a long-standing question in microbial genetics.
Main Methods:
The researchers used genetic and biochemical approaches to study the SinR and SlrR proteins. They analyzed how these proteins interact with DNA. The team examined the repression of cell separation and motility genes. They tested the binding of SinR and SlrR to specific DNA regions. The study included experiments to assess gene expression levels. The researchers also investigated the feedback loop between SinR and SlrR. They used molecular techniques to observe protein interactions. These methods allowed them to determine the regulatory mechanism behind the ON/OFF switch.
Main Results:
The SinR and SlrR proteins form a complex that represses genes for cell separation and motility. SinR binds to DNA and represses the slrR gene. SlrR, in turn, binds to SinR and prevents it from repressing slrR. This creates a double-negative feedback loop. Once activated, the loop remains in a high SlrR state for extended periods. This state keeps the cell separation and motility genes OFF. The mechanism functions as an epigenetic switch. The findings suggest that this system controls the bistable states in Bacillus subtilis.
Conclusions:
The study concludes that SinR and SlrR form an epigenetic switch in Bacillus subtilis. This switch regulates genes for cell separation and motility. The feedback loop between these proteins maintains the ON/OFF states. The researchers propose that this mechanism explains the bistable behavior observed in the cells. The findings suggest that this system is stable and self-reinforcing. The study does not claim that this is the only regulatory mechanism in the organism. The authors suggest that this switch may be conserved in related bacteria. These conclusions are based on the experimental evidence presented.
Frequently Asked Questions
The SinR and SlrR proteins form a double-negative feedback loop that represses genes for cell separation and motility.
SlrR binds to SinR and prevents it from repressing the slrR gene, indirectly derepressing its own gene.
The loop creates a self-reinforcing system that maintains the OFF state of cell separation and motility genes for extended periods.
The complex binds to DNA and represses genes involved in cell separation and motility in Bacillus subtilis.
Once activated, the feedback loop locks into a high SlrR state, keeping the genes OFF for extended periods.
The switch may explain the bistable states observed in the cells and could be conserved in related bacteria.
Related Concept Videos
Gene Regulation During Sporulation
Separation of Sister Chromatids
At the onset of anaphase, separase, a proteolytic enzyme, is...
Binary Fission
Binary Fission
Stringent Response in E. coli
Coordination of Gene Expression Processes in Bacteria

