Electrostatic repulsion between HIV-1 capsid proteins modulates hexamer plasticity and in vitro assembly
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Updated: Jun 13, 2026

Structure of HIV-1 Capsid Assemblies by Cryo-electron Microscopy and Iterative Helical Real-space Reconstruction
Published on: August 9, 2011
Sonia Brun1, Laurent Chaloin, Bernard Gay
1Centre d'études d'agents Pathogènes et Biotechnologies pour la Santé (CPBS), Université Montpellier 1, Montpellier, France.
Insights
Phosphorylation of human immunodeficiency virus type 1 (HIV-1) capsid protein (CA) at specific sites impacts its assembly and core structure. Mimicking phosphorylation at S109 or S149 impairs HIV-1 assembly, while S178 phosphorylation enhances it, affecting viral infectivity.
Area of Science:
- Virology
- Structural Biology
- Molecular Biology
Background:
- The human immunodeficiency virus type 1 (HIV-1) capsid protein (CA) is crucial for viral core formation.
- Three key phosphorylation sites (S109, S149, S178) on CA have been identified, but their functional impact remains unclear.
Purpose of the Study:
- To investigate the effects of phosphorylation at CA's S109, S149, and S178 sites on CA hexamer organization, plasticity, and HIV-1 assembly.
- To evaluate the biological relevance of in silico findings through in vitro and in vivo experiments.
Main Methods:
- In silico molecular modeling to predict the impact of phosphorylation on CA hexamer structure and stability.
- In vitro assembly assays using bacterially expressed CA mutants (S109D, S149D, S178D) mimicking constitutive phosphorylation.
- Analysis of HIV-1 mutant core morphology and infectivity in vivo.
Main Results:
- Constitutive negative charge at S109 or S149 significantly impaired in vitro CA assembly and led to altered core morphology in vivo.
- S149 phosphorylation caused inter-monomer repulsions within the CA hexamer; S109 phosphorylation led to bond cleavage, destabilizing the hexamer.
- S178 phosphorylation facilitated in vitro and in vivo CA assembly into core-like structures and enhanced hexamer stability in silico.
- All studied HIV-1 mutants exhibited a complete loss of infectivity due to impaired proviral DNA production.
Conclusions:
- Phosphorylation, mimicked by negative charges, modulates the assembly capacity of HIV-1 CA.
- These phosphorylation events significantly affect the structural properties of CA hexamers and the overall HIV-1 core.
- Phosphorylation at these sites interferes with HIV-1 core organization and the viral replicative cycle, impacting infectivity.
Abstract:
Capsid protein (CA) is the major component of the human immunodeficiency virus type 1 (HIV-1) core. Three major phosphorylation sites have been identified at positions S(109), S(149) and S(178) in the amino-acid sequence of CA. Here, we investigated the possible consequences of phosphorylation at these sites on the CA hexamer organization and plasticity using in silico approaches. The biological relevance of molecular modeling was then evaluated by analyzing the in vitro assembly properties of bacterially expressed CA bearing S(109)D, S(149)D, or S(178)D substitutions that mimic constitutive phosphorylation at these sites. We found that a constitutive negative charge at position 109 or 149 impaired the capacity of mature CA to assemble in vitro. In vivo, HIV-1 mutants bearing the corresponding mutation showed dramatic alterations of core morphology. At the level of CA hexamer, S(149) phosphorylation generates inter-monomer repulsions, while phosphorylation at position 109 resulted in cleavage of important bonds required for preserving the stability of the edifice. Addition of a negative charge at position 178 allowed efficient assembly of CA into core-like structures in vitro and in vivo and significantly increased CA hexamer stability when modeled in silico. All mutant viruses studied lacked infectivity since they were unable to produce proviral DNA. Altogether our data indicate that negative charges, that mimic phosphorylation, modulate assembling capacity of CA and affect structural properties of CA hexamers and of HIV-1 cores. In the context of the assembled core, phosphorylation at these sites may be considered as an event interfering with core organization and HIV-1 replicative cycle.
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