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Terminating human mitochondrial protein synthesis: a shift in our thinking
Robert N Lightowlers1, Zofia M A Chrzanowska-Lightowlers
1Institute for Ageing and Health, Newcastle University, Newcastle upon Tyne, UK.
Abstract:
Until recently, human mitochondria were regarded as unusual as they appeared to employ four stop codons to terminate translation. In addition to the UAA/UAG of the universal genetic code, two arginine triplets (AGA/AGG) had been re-assigned as termination signals. This posed the conundrum of what factor was responsible for recognizing these triplets to promote translation termination? Recent data indicates that in fact no protein is required to recognize AGA/AGG. Indeed, it is the absence of any cognate factor, tRNA or polypeptide that is important. On encountering either of these 'hungry' codons at the end of an open reading frame, instead of requiring a novel or modified release factor, human mitoribosomes employ -1 frameshifting to reposition a standard UAG codon in the A-site, indicating that only the universal UAA and UAG are used as stop codons. This renders a single mitochondrial release factor, mtRF1a, previously shown to be capable of terminating 11 of the 13 open reading frames encoded by the mitochondrial genome, to be sufficient to release all nascent human mitochondrial gene products from the mitoribosome.
Insights
Human mitochondria translation termination is not unusual. AGA/AGG codons trigger -1 frameshifting, allowing standard stop codons and a single release factor to terminate all mitochondrial gene products.
Area of Science:
- Molecular Biology
- Genetics
- Biochemistry
Background:
- Human mitochondria were thought to use four stop codons (UAA, UAG, AGA, AGG) for translation termination.
- The reassignment of arginine codons (AGA/AGG) as stop codons presented a puzzle regarding termination factor recognition.
Purpose of the Study:
- To investigate the mechanism of translation termination for AGA/AGG codons in human mitochondria.
- To determine the factors involved in recognizing these non-universal stop codons.
Main Methods:
- Analysis of mitochondrial translation termination mechanisms.
- Investigation of ribosomal frameshifting events.
- Assessment of mitochondrial release factor (mtRF1a) sufficiency.
Main Results:
- Human mitochondria do not utilize AGA/AGG as direct stop codons.
- Absence of a cognate release factor or tRNA for AGA/AGG triggers -1 ribosomal frameshifting.
- This frameshift repositions a standard UAG stop codon in the ribosomal A-site.
- The universal stop codons UAA and UAG are sufficient for human mitochondrial translation termination.
- A single mitochondrial release factor, mtRF1a, is sufficient to terminate all 13 encoded mitochondrial genes.
Conclusions:
- Human mitochondrial translation termination relies on a conserved mechanism involving ribosomal frameshifting, not novel stop codons.
- The mitochondrial genetic code employs a simplified termination system utilizing only UAA and UAG, recognized by mtRF1a.
- This finding resolves the previous conundrum of AGA/AGG codon usage in human mitochondrial translation.
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