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Isolation of Fidelity Variants of RNA Viruses and Characterization of Virus Mutation Frequency
Published on: June 16, 2011
Does mutational robustness inhibit extinction by lethal mutagenesis in viral populations?
Eamon B O'Dea1, Thomas E Keller, Claus O Wilke
1Section of Integrative Biology, The University of Texas at Austin, Austin, Texas, United States of America.
Plos Computational Biology
|June 16, 2010
Summary
Lethal mutagenesis therapy may face viral resistance through increased mutational robustness. However, this study shows viral extinction is unlikely to be prevented by robustness evolution, even with higher mutation rates.
Area of Science:
- Virology
- Evolutionary Biology
- Computational Biology
Background:
- Lethal mutagenesis is an antiviral strategy that increases viral mutation rates to induce extinction.
- Viral genomes may evolve increased mutational robustness, potentially resisting this therapy.
- Understanding the interplay between robustness evolution and extinction is crucial for antiviral development.
Purpose of the Study:
- To investigate the extent to which mutational robustness can inhibit viral extinction induced by lethal mutagenesis.
- To assess the impact of robustness evolution on the mutation rate required for viral extinction.
- To determine the conditions under which robustness evolution becomes relevant on extinction timescales.
Main Methods:
- Utilized simple toy models and biophysically realistic models based on RNA secondary-structure folding.
- Employed an analytic multi-type branching process model.
- Performed stochastic calculations and simulations of self-replicating RNA sequences.
Main Results:
- Increased mutation rates can promote the evolution of greater mutational robustness.
- Robustness evolution is unlikely to significantly increase the mutation rate required for viral extinction.
- Robustness evolution is relevant only for small viral populations and mutation rates slightly above the extinction threshold.
Conclusions:
- The evolution of mutational robustness is generally unlikely to prevent viral extinction via lethal mutagenesis.
- Lethal mutagenesis remains a promising antiviral strategy despite potential viral adaptation.
- Further research may explore other viral resistance mechanisms or refine lethal mutagenesis protocols.
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