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Updated: Jun 12, 2026

A Standardized Method for the Analysis of Liver Sinusoidal Endothelial Cells and Their Fenestrations by Scanning Electron Microscopy
Published on: April 30, 2015
Three-dimensional structured illumination microscopy of liver sinusoidal endothelial cell fenestrations
Victoria C Cogger1, Gregory P McNerney, Tun Nyunt
1Centre for Education and Research on Ageing and the ANZAC Research Institute, Sydney Medical School, University of Sydney and Concord RG Hospital, Sydney 2139, Australia. victoria.cogger@sydney.edu.au
Structured illumination microscopy revealed the 3D structure of liver fenestrations, showing they are short pores in thin cytoplasmic areas. This technique enhances understanding of fenestrations
Area of Science:
- Cell biology
- Hepatology
- Microscopy
Background:
- Liver fenestrations are crucial for blood-hepatocyte exchange but their small size limits study.
- Fenestrations play roles in aging and lipoprotein regulation.
Purpose of the Study:
- To elucidate the 3D structure and location of fenestrations using advanced microscopy.
- To investigate the relationship between fenestrations, sieve plates, and cellular components.
Main Methods:
- Structured illumination microscopy (SIM) was used to visualize fenestrations in isolated rat liver sinusoidal endothelial cells.
- SIM provided high spatial resolution for 3D structural analysis.
- Fluorescent immunostaining was employed for co-localization studies.
Main Results:
- Fenestrations have a 3D diameter of 123+/-24 nm and occur in thin cytoplasmic regions (165+/-54 nm).
- Sieve plates were not co-localized with F-actin or eNOS, but with attenuated cell membrane regions.
- Fenestrations were identified as short cylindrical pores, not labyrinthine structures.
Conclusions:
- 3D SIM enables detailed structural and functional insights into liver fenestrations and sieve plates.
- This technique overcomes previous limitations in studying fenestrations.
- New information on fenestration morphology and cellular associations was revealed.
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