Activation of guanine-β-D-arabinofuranoside and deoxyguanosine to triphosphates by a common pathway blocks T lymphoblasts at different checkpoints
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Updated: Jun 11, 2026

A High-Throughput Enzyme-Coupled Activity Assay to Probe Small Molecule Interaction with the dNTPase SAMHD1
Published on: April 16, 2021
Luigi Leanza1, Cristina Miazzi, Paola Ferraro
1Department of Biology, University of Padova, Padova, Italy.
Abstract:
The deoxyguanosine (GdR) analog guanine-ß-d-arabinofuranoside (araG) has a specific toxicity for T lymphocytes. Also GdR is toxic for T lymphocytes, provided its degradation by purine nucleoside phosphorylase (PNP) is prevented, by genetic loss of PNP or by enzyme inhibitors. The toxicity of both nucleosides requires their phosphorylation to triphosphates, indicating involvement of DNA replication. In cultured cells we found by isotope-flow experiments with labeled araG a rapid accumulation and turnover of araG phosphates regulated by cytosolic and mitochondrial kinases and deoxynucleotidases. At equilibrium their partition between cytosol and mitochondria depended on the substrate saturation kinetics and cellular abundance of the kinases leading to higher araGTP concentrations in mitochondria. dGTP interfered with the allosteric regulation of ribonucleotide reduction, led to highly imbalanced dNTP pools with gradual inhibition of DNA synthesis and cell-cycle arrest at the G1-S boundary. AraGTP had no effect on ribonucleotide reduction. AraG was in minute amounts incorporated into nuclear DNA and stopped DNA synthesis arresting cells in S-phase. Both nucleosides eventually induced caspases and led to apoptosis. We used high, clinically relevant concentrations of araG, toxic for nuclear DNA synthesis. Our experiments do not exclude an effect on mitochondrial DNA at low araG concentrations when phosphorylation occurs mainly in mitochondria.
Insights
Guanine analogs, guanine-ß-d-arabinofuranoside (araG) and deoxyguanosine (GdR), exhibit T lymphocyte toxicity by interfering with DNA replication and inducing apoptosis. Their phosphorylation and cellular distribution influence toxicity, impacting DNA synthesis and cell cycle progression.
Area of Science:
- Biochemistry
- Molecular Biology
- Immunology
Background:
- Deoxyguanosine (GdR) and its analog guanine-ß-d-arabinofuranoside (araG) demonstrate specific toxicity towards T lymphocytes.
- This toxicity is linked to purine nucleoside phosphorylase (PNP) activity and requires intracellular phosphorylation to triphosphate forms, implicating DNA replication.
- Understanding the mechanisms of these nucleoside analogs is crucial for developing targeted therapies.
Purpose of the Study:
- To elucidate the mechanism of toxicity of guanine-ß-d-arabinofuranoside (araG) and deoxyguanosine (GdR) in T lymphocytes.
- To investigate the role of intracellular phosphorylation and subcellular localization in nucleoside analog-induced cytotoxicity.
- To determine the impact of these nucleosides on DNA synthesis, cell cycle progression, and apoptosis.
Main Methods:
- Isotope-labeled araG and flow cytometry were used to track araG phosphate accumulation and turnover in cultured cells.
- Kinetic analysis of cytosolic and mitochondrial kinases and deoxynucleotidases was performed.
- Effects on dNTP pools, ribonucleotide reductase activity, DNA synthesis, cell cycle, and apoptosis were assessed.
Main Results:
- araG phosphates rapidly accumulate and turn over, with distribution between cytosol and mitochondria influenced by kinase kinetics, leading to higher mitochondrial araGTP.
- Deoxyguanosine triphosphate (dGTP) imbalances disrupt ribonucleotide reduction, inhibit DNA synthesis, and cause G1-S cell cycle arrest.
- araGTP does not affect ribonucleotide reduction, but araG incorporation into DNA halts DNA synthesis, arresting cells in S-phase and inducing apoptosis via caspases.
Conclusions:
- Both GdR and araG induce T lymphocyte apoptosis through mechanisms involving DNA replication interference and cell cycle arrest.
- Subcellular localization of phosphorylation significantly impacts araGTP levels and subsequent cytotoxicity.
- While high araG concentrations primarily affect nuclear DNA synthesis, potential effects on mitochondrial DNA at lower concentrations warrant further investigation.
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