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Updated: Jun 10, 2026

Monitoring Protein-RNA Interaction Dynamics In Vivo at High Temporal Resolution Using χCRAC
Published on: May 9, 2020
An emerging role for nuclear RNA-mediated responses to genotoxic stress
1Department of Public Health and Cell Biology, University of Rome Tor Vergata, Rome, Italy.
Abstract:
Defects in the regulation of alternative splicing have strong relevance in the onset and progression of several types of human cancer. Modulation of alternative splicing allows cancer cells to adapt to hostile environments through production of specific mRNA variants. In particular, genotoxic stress exerted by chemotherapeutic drugs or irradiation strongly affects splicing of many genes. A key role in this aberrant regulation is played by the unbalanced expression of several splicing factors in cancer cells. Among them, the RNA-binding protein Sam68, which is overexpressed in various tumors, was shown to accumulate in nuclear foci of active transcription, together with other splicing regulators, and to affect splicing of target mRNAs in response to genotoxic stress. We suggest that subcellular redistribution of splicing factors is guided by changes in chromatin conformation elicited by DNA-damaging drugs. This event might represent an escape mechanism used by cancer cells to survive to genotoxic insults through expression of pro-survival, cancer-specific gene products.
Insights
Alternative splicing defects are crucial in cancer development. Cancer cells alter splicing factor Sam68 localization under genotoxic stress to survive, producing cancer-specific gene products.
Area of Science:
- Molecular Biology
- Cancer Research
- Genetics
Background:
- Alternative splicing dysregulation is implicated in human cancer onset and progression.
- Cancer cells adapt to hostile environments by modulating mRNA variants through alternative splicing.
- Genotoxic stress from chemotherapy or irradiation significantly impacts gene splicing.
Purpose of the Study:
- To investigate the role of splicing factor Sam68 in cancer cells' response to genotoxic stress.
- To explore the mechanism by which cancer cells survive DNA-damaging insults via altered splicing.
- To understand the link between chromatin conformation changes and splicing factor redistribution.
Main Methods:
- Analysis of splicing factor expression and localization in cancer cells.
- Investigating the impact of genotoxic stress on gene splicing patterns.
- Studying the role of RNA-binding protein Sam68 in response to DNA-damaging agents.
Main Results:
- Overexpressed Sam68 in tumors accumulates in nuclear foci during genotoxic stress.
- Sam68 affects the splicing of target mRNAs in response to genotoxic stress.
- Genotoxic drugs induce changes in chromatin conformation, guiding splicing factor redistribution.
Conclusions:
- Subcellular redistribution of splicing factors, like Sam68, is guided by DNA-damage-induced chromatin changes.
- This redistribution is a potential cancer cell survival mechanism against genotoxic insults.
- Cancer cells may utilize altered splicing to express pro-survival, cancer-specific gene products.
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