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PLCD1 is a functional tumor suppressor inducing G(2)/M arrest and frequently methylated in breast cancer
Tingxiu Xiang1, Lili Li, Yichao Fan
1Molecular Oncology and Epigenetics Laboratory, The First Affiliated Hospital, Chongqing Medical University, Chongqing, China.
Abstract:
Chromosome 3p harbors multiple tumor-suppressor genes. PLCD1, located at 3p22, encodes an enzyme that mediates regulatory signaling of energy metabolism, calcium homeostasis and intracellular movement. We investigated the epigenetic alterations of PLCD1 and its tumor suppressor function in breast cancer. Frequent downregulation/silencing of PLCD1 was shown in most breast cancer cell lines by using semi-quantitative PCR. Promoter methylation of PLCD1 was detected in 78% (7/9) of cell lines and 52% (13/25) of primary tumors by Methylation-specific PCR (MSP), but not in any tumor adjacent breast tissues and normal breast tissues, which was further confirmed by bisulfite genomic sequencing (BGS). The silencing of PLCD1 could be reversed by pharmacological demethylation, indicating a methylation-mediated mechanism. Ectopic expression of PLCD1 in silenced breast cancer cells significantly inhibited their colony formation. In addition, PLCD1 inhibited tumor cell migration and induced cell cycle G(2)/M arrest. Thus, this study for the first time demonstrates the frequent inactivation of PLCD1 by promoter methylation and its tumor inhibitory function in breast cancer. Tumor-specific methylation of PLCD1 might serve as a biomarker for possible early detection and prognosis prediction of breast cancer.
Insights
Phospholipase C delta 1 (PLCD1) is frequently silenced by promoter methylation in breast cancer, acting as a tumor suppressor. This epigenetic silencing inhibits tumor growth, migration, and promotes cell cycle arrest, suggesting PLCD1 as a potential biomarker.
Area of Science:
- Cancer epigenetics
- Molecular oncology
- Tumor suppressor genes
Background:
- Chromosome 3p contains critical tumor suppressor genes involved in cancer development.
- PLCD1 (Phospholipase C delta 1), located at 3p22, plays roles in cellular signaling pathways.
- Epigenetic alterations, particularly promoter methylation, are key mechanisms for gene silencing in cancer.
Purpose of the Study:
- To investigate the epigenetic alterations of PLCD1 in breast cancer.
- To determine the tumor suppressor function of PLCD1 in breast cancer.
- To evaluate PLCD1 methylation as a potential biomarker for breast cancer.
Main Methods:
- Semi-quantitative PCR to assess PLCD1 expression levels.
- Methylation-specific PCR (MSP) and Bisulfite Genomic Sequencing (BGS) to detect promoter methylation.
- Pharmacological demethylation and ectopic PLCD1 expression in cancer cell lines.
Main Results:
- Frequent downregulation and silencing of PLCD1 observed in breast cancer cell lines.
- High frequency of PLCD1 promoter methylation in breast cancer cell lines (78%) and primary tumors (52%), absent in normal tissues.
- Pharmacological demethylation reversed PLCD1 silencing; ectopic PLCD1 expression inhibited colony formation, migration, and induced G2/M cell cycle arrest.
Conclusions:
- PLCD1 is frequently inactivated by promoter methylation in breast cancer, confirming its role as a tumor suppressor.
- PLCD1's tumor-inhibitory functions include suppressing proliferation, migration, and inducing cell cycle arrest.
- Tumor-specific methylation of PLCD1 presents a potential biomarker for early detection and prognosis of breast cancer.
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