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Updated: Jun 10, 2026

Continuous Fluorescence-Based Endonuclease-Coupled DNA Methylation Assay to Screen for DNA Methyltransferase Inhibitors
Published on: August 5, 2022
Nijmegen breakage syndrome protein (NBN) causes resistance to methylating anticancer drugs such as temozolomide
Marcus Eich1, Wynand P Roos, Grigory L Dianov
1Institute of Toxicology, Medical Center of the University Mainz, Obere Zahlbacher Str 67, D-55131 Mainz, Germany.
Abstract:
Methylating agents are first-line therapeutics for gliomas and malignant melanomas. They attack DNA at various sites, and both O(6)-methylguanine and N-methylated base adducts contribute to the killing response. The mechanism of cellular defense against these agents primarily involves O(6)-methylguanine-DNA methyltransferase (MGMT) and base excision repair (BER). Here, we determined whether a key protein involved in DNA double-strand break (DSB) recognition and signaling, nibrin (NBN alias NBS-1), plays a role in the cellular defense against methylating agents. Comparing NBN mutated fibroblasts and lymphoblastoid cells from patients suffering from Nijmegen breakage syndrome, we show that NBN mutants are clearly more sensitive to N-methyl-N'-nitro-N-nitrosoguanidine and temozolomide than the corresponding wild-type cells. Hypersensitivity was due to the induction of both apoptosis and necrosis. The mismatch repair proteins MSH2, MSH6, MLH1, and PMS2 were expressed at a similar level in the cell lines and BER was not affected by NBN mutation. Because MGMT expression abrogated the hypersensitivity of NBN mutated cells, we conclude that O(6)-methylguanine-derived lesions are responsible for triggering the response. Down-regulation of NBN in melanoma cells by small interfering RNA rendered them more sensitive to temozolomide, suggesting that NBN is a novel modulator of temozolomide sensitivity. Because NBN is part of the MRN complex, which recognizes DSBs, the data strongly indicate that MRN is critically involved in DSB processing after O(6)-methylguanine induction. The data provide first evidence that NBN is involved in the cellular defense against O(6)-methylguanine-inducing agents such as temozolomide and identify NBN as a critical target of methylating anticancer drug resistance.
Insights
Nibrin (NBN) plays a crucial role in defending cells against methylating agents like temozolomide, commonly used for gliomas and melanomas. NBN-deficient cells show increased sensitivity, highlighting NBN as a target for overcoming drug resistance.
Area of Science:
- Oncology
- Molecular Biology
- Genetics
Background:
- Methylating agents are vital in treating gliomas and melanomas.
- Cellular defense involves O(6)-methylguanine-DNA methyltransferase (MGMT) and base excision repair (BER).
- The role of nibrin (NBN) in defense against these agents was previously unclear.
Purpose of the Study:
- To investigate the role of nibrin (NBN) in cellular defense against methylating agents.
- To determine if NBN influences sensitivity to temozolomide and other methylating agents.
Main Methods:
- Compared NBN-mutated cells (fibroblasts, lymphoblastoid) with wild-type cells.
- Assessed sensitivity to N-methyl-N'-nitro-N-nitrosoguanidine and temozolomide.
- Analyzed apoptosis, necrosis, mismatch repair protein levels, and BER activity.
- Utilized small interfering RNA to down-regulate NBN in melanoma cells.
Main Results:
- NBN-mutated cells exhibited hypersensitivity to methylating agents, leading to apoptosis and necrosis.
- MGMT expression counteracted the hypersensitivity, indicating O(6)-methylguanine lesions trigger the response.
- NBN down-regulation in melanoma cells increased temozolomide sensitivity.
- Mismatch repair and BER pathways were unaffected by NBN mutation.
Conclusions:
- Nibrin (NBN) is involved in cellular defense against O(6)-methylguanine-inducing agents.
- NBN acts as a novel modulator of temozolomide sensitivity in cancer.
- The MRN complex, including NBN, is critical for processing DNA double-strand breaks induced by O(6)-methylguanine.
- NBN is a potential target for enhancing the efficacy of methylating anticancer drugs.
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