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Updated: Jun 9, 2026

Characterizing Microbiome Dynamics – Flow Cytometry Based Workflows from Pure Cultures to Natural Communities
Published on: July 12, 2018
From structure to function: the ecology of host-associated microbial communities
Courtney J Robinson1, Brendan J M Bohannan, Vincent B Young
1Department of Internal Medicine, Division of Infectious Diseases, University of Michigan, 4618D Medical Sciences II, 1150 W. Medical Center Dr., Ann Arbor, MI 48109-5623, USA.
Environmental microbiology research has advanced human microbiome studies. Applying ecological theory to the human microbiota can improve understanding of its function, aiding disease prevention and treatment.
Area of Science:
- Microbiology
- Ecology
- Human Health
Background:
- Recent surge in interest in the human microbiota's structure and function.
- Pioneering work by microbial ecologists in non-host-associated environments laid groundwork.
- Interdisciplinary collaboration is crucial for advancing human microbiome research.
Purpose of the Study:
- To review advances in human microbiome research driven by environmental microbiology.
- To explore future directions for collaboration between environmental and human microbiota researchers.
- To highlight the application of ecological theory for understanding human microbiota function.
Main Methods:
- Review of existing literature on microbial ecology and the human microbiome.
- Analysis of the impact of ecological principles on human microbiota research.
- Discussion of potential applications in disease prevention and treatment.
Main Results:
- Environmental microbiology has significantly contributed to human microbiome understanding.
- Ecological theory provides a framework to move beyond descriptive studies to functional insights.
- Collaboration enhances the study of microbial communities in both host-associated and environmental settings.
Conclusions:
- Continued collaboration between environmental microbiologists and human microbiota researchers is vital.
- Applying ecological theory to the human microbiota can revolutionize disease prevention and treatment.
- Restoring microbial community structure and function holds therapeutic potential.
Related Concept Videos
Introduction to Microbial Ecology
Ecological Niche
Methods to Assess Microbial Communities
Marine Microbial Ecology
Introduction to the Human Microbiota
Environmental Applications of Microorganisms

