Related Experiment Video
Updated: Jun 8, 2026

Production, Crystallization, and Structure Determination of the IKK-binding Domain of NEMO
Published on: December 28, 2019
ATM- and NEMO-dependent ELKS ubiquitination coordinates TAK1-mediated IKK activation in response to genotoxic stress
Zhao-Hui Wu1, Ee Tsin Wong, Yuling Shi
1Department of Pathology and Laboratory Medicine, University of Tennessee Health Science Center, Memphis, TN 38163, USA. zwu6@uthsc.edu
Abstract:
Activation of the transcription factor NF-κB by multiple genotoxic stimuli modulates cancer cell survival. This response is mediated by a conserved pathway involving the nuclear ATM kinase and cytoplasmic IκB kinase (IKK); however, the molecular link between them remains incompletely understood. Here we show that ATM activates the IKK kinase TAK1 in a manner dependent on IKKγ/NEMO and ELKS (a protein rich in glutamate, leucine, lysine, and serine). K63-linked polyubiquitination of ELKS, dependent on the ubiquitin ligase XIAP and the conjugating enzyme UBC13, allows ELKS association with TAK1 via its ubiquitin-binding subunits TAB2/3. Although NEMO mutants defective in ubiquitin binding permit ATM-dependent TAK1 activation, they block NEMO association with ELKS and IKK activation. Thus, ATM- and NEMO-dependent ubiquitination of ELKS leads to the ubiquitin-dependent assembly of TAK1/TAB2/3 and NEMO/IKK complexes, resulting in IKK and NF-κB activation following genotoxic stimuli.
Insights
Genotoxic stimuli activate NF-κB survival pathways via ATM and IKK. This study reveals ELKS ubiquitination as a key molecular link, assembling essential protein complexes for NF-κB activation.
Area of Science:
- Molecular Biology
- Cellular Signaling
- Cancer Research
Background:
- The transcription factor NF-κB regulates cancer cell survival following genotoxic stress.
- This pathway involves ATM kinase and IκB kinase (IKK), but the molecular link is unclear.
Purpose of the Study:
- To elucidate the molecular mechanism connecting ATM and IKK activation.
- To identify key proteins and modifications involved in the NF-κB response to genotoxic stimuli.
Main Methods:
- Investigated protein interactions and ubiquitination events in response to genotoxic stimuli.
- Utilized genetic mutations and protein complex analysis to dissect the signaling pathway.
Main Results:
- Demonstrated that ATM activates TAK1 kinase through a complex involving IKKγ/NEMO and ELKS.
- Showed that K63-linked polyubiquitination of ELKS by XIAP and UBC13 is crucial for TAK1 association.
- Identified that NEMO's ubiquitin-binding function is essential for ELKS interaction and subsequent IKK activation.
Conclusions:
- ATM and NEMO-dependent ubiquitination of ELKS is critical for assembling the TAK1/TAB2/3 and NEMO/IKK complexes.
- This ubiquitination-dependent complex assembly mediates IKK and NF-κB activation following genotoxic stress, clarifying a key survival pathway in cancer cells.
Related Concept Videos
NF-κB-dependent Signaling Pathway
NF-κB-dependent Signaling Mechanism
The heterodimer of NF-κB...
Regulation of the Unfolded Protein Response
DNA Damage can Stall the Cell Cycle
DNA Damage Can Stall the Cell Cycle
Nucleotide Excision Repair
Nucleotide Excision Repair
Cells are regularly exposed to mutagens—factors in the environment that can damage DNA and generate mutations. UV radiation is one of the most common mutagens and is estimated to introduce a significant number of changes in DNA. These include bends or kinks in the structure, which can block DNA replication or transcription. If these errors are not fixed, the damage can cause mutations, which in turn can result in cancer or disease depending on which sequences are...

