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Tagging and Fusion Proteins01:24

Tagging and Fusion Proteins

Proteins are involved in several cellular processes and biochemical reactions. Analyzing a specific protein of interest requires it to be isolated from the other proteins in the cell. This is achieved by overexpressing the specific gene in a suitable host to produce large quantities of the target protein. A tag or label is recombined with the gene to produce a fusion protein containing the target protein and the tag. The tags on these fusion proteins can then be used for easy detection and...
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Allosteric proteins have more than one ligand binding site; the binding of a ligand to any of these sites influences the binding of ligands to the other sites. When a protein is allosteric, its binding sites are called coupled or linked.  In the case of enzymes, the site that binds to the substrate is known as the active site and the other site is known as the regulatory site. When a ligand binds to the regulatory site, this leads to conformational changes in the protein that can influence the...
Ligand Binding and Linkage00:49

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Allosteric proteins have more than one ligand binding site; the binding of a ligand to any of these sites influences the binding of ligands to the other sites. When a protein is allosteric, its binding sites are called coupled or linked.  In the case of enzymes, the site that binds to the substrate is known as the active site and the other site is known as the regulatory site. When a ligand binds to the regulatory site, this leads to conformational changes in the protein that can influence the...

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Combining Chemical Cross-linking and Mass Spectrometry of Intact Protein Complexes to Study the Architecture of Multi-subunit Protein Assemblies
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Combining Chemical Cross-linking and Mass Spectrometry of Intact Protein Complexes to Study the Architecture of Multi-subunit Protein Assemblies

Published on: November 28, 2017

Reeling in the catch: advancing cleavable linkers for proteomics.

Meng M Rowland1, Michael D Best

  • 1Department of Chemistry, The University of Tennessee, 1420 Circle Drive, Knoxville, TN 37996, USA.

Chemistry & Biology
|November 25, 2010
PubMed
Summary

Researchers developed a novel diazobenzene-cleavable linker system to improve protein purification in bioorthogonal chemistry applications. This breakthrough aids in the effective release of labeled proteins for global proteomic studies.

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Combining Chemical Cross-linking and Mass Spectrometry of Intact Protein Complexes to Study the Architecture of Multi-subunit Protein Assemblies
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Area of Science:

  • Biochemistry
  • Chemical Biology
  • Proteomics

Background:

  • Global proteomic studies often involve derivatizing proteins using bioorthogonal chemistry.
  • A significant challenge in these applications is the efficient release of purified, labeled proteins from solid supports.

Discussion:

  • This study investigates the utility of a diazobenzene-cleavable linker system for addressing the protein release challenge.
  • The diazobenzene linker offers a chemical strategy for controlled cleavage and liberation of tagged proteins.

Key Insights:

  • The diazobenzene-cleavable linker system demonstrates effectiveness in facilitating the release of derivatized proteins.
  • This method provides a robust solution for sample preparation in complex proteomic workflows.
  • Successful implementation enables more accurate protein characterization and analysis.

Outlook:

  • Further optimization of linker chemistry could enhance compatibility with diverse bioorthogonal reactions.
  • This approach holds potential for advancing high-throughput proteomic analyses.
  • The developed system may find applications in other areas requiring controlled release of biomolecules.